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Acsl6 acyl-CoA synthetase long chain family member 6 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100762894, updated on 8-Mar-2024

Summary

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Gene symbol
Acsl6
Gene description
acyl-CoA synthetase long chain family member 6
See related
Ensembl:ENSCGRG00015021632
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 7
Exon count:
22
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613733.1 (269984..372134)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 7 NC_048600.1 (68443210..68546928)

NW_003613733.1Genomic Context describing neighboring genes Neighboring gene tubulin alpha-1B chain-like Neighboring gene colony stimulating factor 2 Neighboring gene meiotic kinetochore factor Neighboring gene folliculin interacting protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables arachidonate-CoA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in long-chain fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in long-chain fatty-acyl-CoA biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in very long-chain fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
long-chain-fatty-acid--CoA ligase 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613733.1 Reference CriGri_1.0 Primary Assembly

    Range
    269984..372134
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035453036.1 → XP_035308927.1  long-chain-fatty-acid--CoA ligase 6 isoform X2

    UniProtKB/TrEMBL
    A0A8C2LE10
    Conserved Domains (1) summary
    cd05927
    Location:164 → 742
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)

  2. XM_035453033.1 → XP_035308924.1  long-chain-fatty-acid--CoA ligase 6 isoform X1

    UniProtKB/TrEMBL
    A0A8C2LE10
    Conserved Domains (1) summary
    cd05927
    Location:164 → 762
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048600.1 Alternate CriGri-PICRH-1.0

    Range
    68443210..68546928
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027427502.2 → XP_027283303.1  long-chain-fatty-acid--CoA ligase 6 isoform X9

    UniProtKB/TrEMBL
    A0A8C2LE10, A0A9J7GDQ9
    Related
    ENSCGRP00015031216.2, ENSCGRT00015038141.2

  2. XM_027427501.2 → XP_027283302.1  long-chain-fatty-acid--CoA ligase 6 isoform X8

    UniProtKB/TrEMBL
    A0A8C2LBE2, A0A9J7GG45
    Related
    ENSCGRP00015031242.2, ENSCGRT00015038167.2

  3. XM_027427496.2 → XP_027283297.1  long-chain-fatty-acid--CoA ligase 6 isoform X4

    UniProtKB/TrEMBL
    A0A8C2LE10, A0A9J7GD82
    Related
    ENSCGRP00015056323.1, ENSCGRT00015064958.1

  4. XM_027427495.2 → XP_027283296.1  long-chain-fatty-acid--CoA ligase 6 isoform X3

    UniProtKB/TrEMBL
    A0A8C2LBE2, A0A9J7GD80
    Related
    ENSCGRP00015031143.1, ENSCGRT00015038060.2

  5. XM_027427500.2 → XP_027283301.1  long-chain-fatty-acid--CoA ligase 6 isoform X7

    UniProtKB/TrEMBL
    A0A8C2LBE2, A0A9J7GG29
    Related
    ENSCGRP00015031200.1, ENSCGRT00015038121.2

  6. XM_027427498.2 → XP_027283299.1  long-chain-fatty-acid--CoA ligase 6 isoform X6

    UniProtKB/TrEMBL
    A0A8C2LBE2, A0A9J7JZA9
    Related
    ENSCGRP00015031118.2, ENSCGRT00015038032.2

  7. XM_027427497.2 → XP_027283298.1  long-chain-fatty-acid--CoA ligase 6 isoform X5

    UniProtKB/TrEMBL
    A0A8C2LE10, A0A9J7GHU3
    Related
    ENSCGRP00015031293.2, ENSCGRT00015038231.2
Nucleotide Protein Strain
Heading Accession and Version

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