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Suv39h1 SUV39H1 histone lysine methyltransferase [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100764568, updated on 8-Mar-2024

Summary

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Gene symbol
Suv39h1
Gene description
SUV39H1 histone lysine methyltransferase
See related
Ensembl:ENSCGRG00015006943
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: X
Exon count:
6
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614122.1 (749434..762893, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) X NC_048604.1 (114529211..114542794, complement)

NW_003614122.1Genomic Context describing neighboring genes Neighboring gene glyoxalase domain containing 5 Neighboring gene 40S ribosomal protein SA-like Neighboring gene uncharacterized LOC103163619 Neighboring gene U6 spliceosomal RNA Neighboring gene WASP actin nucleation promoting factor Neighboring gene WD repeat domain 13

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables histone H3K9 methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
histone-lysine N-methyltransferase SUV39H1
Names
Histone-lysine N-methyltransferase SUV39H1
suppressor of variegation 3-9 homolog 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003614122.1 Reference CriGri_1.0 Primary Assembly

    Range
    749434..762893 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007645636.4 → XP_007643826.1  histone-lysine N-methyltransferase SUV39H1 isoform X1

    See identical proteins and their annotated locations for XP_007643826.1

    UniProtKB/TrEMBL
    A0A061HZB3, A0A9J7K2W4
    Conserved Domains (3) summary
    smart00468
    Location:137 → 232
    PreSET; N-terminal to some SET domains
    smart00317
    Location:248 → 371
    SET; SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain
    pfam00385
    Location:49 → 96
    Chromo; Chromo (CHRromatin Organization MOdifier) domain

  2. XM_003505103.5 → XP_003505151.1  histone-lysine N-methyltransferase SUV39H1 isoform X2

    See identical proteins and their annotated locations for XP_003505151.1

    UniProtKB/TrEMBL
    A0A061HZB3, G3HND6
    Conserved Domains (3) summary
    smart00468
    Location:132 → 227
    PreSET; N-terminal to some SET domains
    smart00317
    Location:243 → 366
    SET; SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain
    pfam00385
    Location:44 → 91
    Chromo; Chromo (CHRromatin Organization MOdifier) domain

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048604.1 Alternate CriGri-PICRH-1.0

    Range
    114529211..114542794 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027433320.2 → XP_027289121.1  histone-lysine N-methyltransferase SUV39H1 isoform X1

    UniProtKB/TrEMBL
    A0A061HZB3, A0A9J7K2W4
    Related
    ENSCGRP00015009028.1, ENSCGRT00015011101.2

  2. XM_027433322.2 → XP_027289123.1  histone-lysine N-methyltransferase SUV39H1 isoform X2

    UniProtKB/TrEMBL
    A0A061HZB3, G3HND6

  3. XM_027433319.2 → XP_027289120.1  histone-lysine N-methyltransferase SUV39H1 isoform X3

    UniProtKB/TrEMBL
    A0A061HZB3, A0A9J7JT58
    Related
    ENSCGRP00015009057.2, ENSCGRT00015011141.2

  4. XM_027433321.2 → XP_027289122.1  histone-lysine N-methyltransferase SUV39H1 isoform X4

    UniProtKB/TrEMBL
    A0A061HZB3, A0A8C2N375
Nucleotide Protein Strain
Heading Accession and Version

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