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B4galnt1 beta-1,4-N-acetyl-galactosaminyltransferase 1 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100764682, updated on 8-Mar-2024

Summary

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Gene symbol
B4galnt1
Gene description
beta-1,4-N-acetyl-galactosaminyltransferase 1
Locus tag
I79_015201
See related
Ensembl:ENSCGRG00015000792
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
9
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614393.1 (579676..585826, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 1 Unlocalized Scaffold NW_023276806.1 (130545007..130551303, complement)

NW_003614393.1Genomic Context describing neighboring genes Neighboring gene Rho guanine nucleotide exchange factor 25 Neighboring gene solute carrier family 26 member 10 Neighboring gene U1 spliceosomal RNA Neighboring gene OS9 endoplasmic reticulum lectin Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ganglioside biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: beta-1,4 N-acetylgalactosaminyltransferase 1; beta-1,4 N-acetylgalactosaminyltransferase 1
Names
Beta-1,4 N-acetylgalactosaminyltransferase 1
beta-1,4 N-acetylgalactosaminyltransferase 1-like protein
beta-1,4-N-acetyl-galactosaminyl transferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003614393.1 Reference CriGri_1.0 Primary Assembly

    Range
    579676..585826 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035459228.1 → XP_035315119.1  LOW QUALITY PROTEIN: beta-1,4 N-acetylgalactosaminyltransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A061IMN3
    Conserved Domains (1) summary
    pfam00535
    Location:307 → 430
    Glycos_transf_2; Glycosyl transferase family 2

Alternate CriGri-PICRH-1.0

Genomic

  1. NW_023276806.1 Alternate CriGri-PICRH-1.0

    Range
    130545007..130551303 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035451923.1 → XP_035307814.1  beta-1,4 N-acetylgalactosaminyltransferase 1 isoform X3

    UniProtKB/TrEMBL
    A0A061ILP0, A0A9J7H9N2
    Conserved Domains (1) summary
    pfam00535
    Location:283 → 429
    Glycos_transf_2; Glycosyl transferase family 2

  2. XM_027392250.2 → XP_027248051.2  beta-1,4 N-acetylgalactosaminyltransferase 1 isoform X2

    UniProtKB/TrEMBL
    A0A061ILP0, A0A9J7F4J5
    Related
    ENSCGRP00015040336.1, ENSCGRT00015066137.1
    Conserved Domains (1) summary
    pfam00535
    Location:316 → 462
    Glycos_transf_2; Glycosyl transferase family 2

  3. XM_035451924.1 → XP_035307815.1  beta-1,4 N-acetylgalactosaminyltransferase 1 isoform X4

    UniProtKB/TrEMBL
    A0A061ILP0, A0A9J7H8Y2
    Conserved Domains (1) summary
    pfam00535
    Location:225 → 371
    Glycos_transf_2; Glycosyl transferase family 2
Nucleotide Protein Strain
Heading Accession and Version

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