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Pafah1b1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100764774, updated on 8-Mar-2024

Summary

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Gene symbol
Pafah1b1
Gene description
platelet activating factor acetylhydrolase 1b regulatory subunit 1
See related
Ensembl:ENSCGRG00015020798
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 7
Exon count:
12
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614347.1 (307618..355677, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 7 NC_048600.1 (88120582..88170099, complement)

NW_003614347.1Genomic Context describing neighboring genes Neighboring gene RAP1 GTPase activating protein 2 Neighboring gene clustered mitochondria homolog Neighboring gene U6 spliceosomal RNA Neighboring gene small EDRK-rich factor 2-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
platelet-activating factor acetylhydrolase IB subunit alpha
Names
Platelet-activating factor acetylhydrolase IB subunit alpha
platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003614347.1 Reference CriGri_1.0 Primary Assembly

    Range
    307618..355677 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007647838.4 → XP_007646028.1  platelet-activating factor acetylhydrolase IB subunit alpha

    See identical proteins and their annotated locations for XP_007646028.1

    UniProtKB/TrEMBL
    A0A8C2LQF6, G3HVB8
    Conserved Domains (3) summary
    cd00200
    Location:104 → 408
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:111 → 148
    7WD40; WD40 repeat [structural motif]
    pfam08513
    Location:10 → 34
    LisH

  2. XM_003507268.3 → XP_003507316.1  platelet-activating factor acetylhydrolase IB subunit alpha

    See identical proteins and their annotated locations for XP_003507316.1

    UniProtKB/TrEMBL
    A0A8C2LQF6, G3HVB8
    Conserved Domains (3) summary
    cd00200
    Location:104 → 408
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:111 → 148
    7WD40; WD40 repeat [structural motif]
    pfam08513
    Location:10 → 34
    LisH

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048600.1 Alternate CriGri-PICRH-1.0

    Range
    88120582..88170099 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027426777.2 → XP_027282578.1  platelet-activating factor acetylhydrolase IB subunit alpha

    UniProtKB/TrEMBL
    A0A8C2LQF6, G3HVB8
    Related
    ENSCGRP00015060691.1, ENSCGRT00015069369.1
    Conserved Domains (3) summary
    cd00200
    Location:104 → 408
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:111 → 148
    7WD40; WD40 repeat [structural motif]
    pfam08513
    Location:10 → 34
    LisH

  2. XM_027426778.2 → XP_027282579.1  platelet-activating factor acetylhydrolase IB subunit alpha

    UniProtKB/TrEMBL
    A0A8C2LQF6, G3HVB8
    Related
    ENSCGRP00015027420.1, ENSCGRT00015033594.2
    Conserved Domains (3) summary
    cd00200
    Location:104 → 408
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:111 → 148
    7WD40; WD40 repeat [structural motif]
    pfam08513
    Location:10 → 34
    LisH

  3. XM_035447367.1 → XP_035303258.1  platelet-activating factor acetylhydrolase IB subunit alpha

    UniProtKB/TrEMBL
    A0A8C2LQF6, G3HVB8
    Conserved Domains (3) summary
    cd00200
    Location:104 → 408
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:111 → 148
    7WD40; WD40 repeat [structural motif]
    pfam08513
    Location:10 → 34
    LisH
Nucleotide Protein Strain
Heading Accession and Version

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