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Sqle squalene epoxidase [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100764834, updated on 8-Mar-2024

Summary

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Gene symbol
Sqle
Gene description
squalene epoxidase
Locus tag
I79_025811
See related
Ensembl:ENSCGRG00015006478
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 10
Exon count:
3
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003623351.1 (945..3188, complement)
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003624135.1 (48..3034, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 10 NC_048603.1 (28317255..28335867, complement)

NW_003624135.1Genomic Context describing neighboring genes

NW_003623351.1Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables flavin adenine dinucleotide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables squalene monooxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cholesterol metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sterol biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
squalene monooxygenase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003623351.1 Reference CriGri_1.0 Primary Assembly

    Range
    945..3188 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003515960.5 → XP_003516008.3  squalene monooxygenase isoform X2

    UniProtKB/TrEMBL
    A0A8C2LVW3, A0A8C2QG82
    Conserved Domains (2) summary
    PRK07045
    Location:124 → 429
    PRK07045; putative monooxygenase; Reviewed
    cl21454
    Location:279 → 550
    NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003624135.1 Reference CriGri_1.0 Primary Assembly

    Range
    48..3034 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007608056.4 → XP_007606246.1  squalene monooxygenase isoform X1

    Conserved Domains (1) summary
    cl21454
    Location:1 → 200
    NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048603.1 Alternate CriGri-PICRH-1.0

    Range
    28317255..28335867 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027431603.2 → XP_027287404.1  squalene monooxygenase isoform X4

    UniProtKB/TrEMBL
    A0A8C2QG82, A0A9J7GL13
    Related
    ENSCGRP00015008372.2, ENSCGRT00015010306.2

  2. XM_027431602.2 → XP_027287403.1  squalene monooxygenase isoform X3

    UniProtKB/TrEMBL
    A0A8C2LVW3, A0A8C2QG82
    Related
    ENSCGRP00015008401.1, ENSCGRT00015010336.2
    Conserved Domains (2) summary
    PRK07045
    Location:124 → 429
    PRK07045; putative monooxygenase; Reviewed
    cl21454
    Location:279 → 550
    NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins
Nucleotide Protein Strain
Heading Accession and Version

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