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Pigm phosphatidylinositol glycan anchor biosynthesis class M [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100764842, updated on 8-Mar-2024

Summary

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Gene symbol
Pigm
Gene description
phosphatidylinositol glycan anchor biosynthesis class M
See related
Ensembl:ENSCGRG00015039420
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 5
Exon count:
1
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613783.1 (877160..882102)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 5 NC_048598.1 (20480911..20485853, complement)

NW_003613783.1Genomic Context describing neighboring genes Neighboring gene potassium inwardly rectifying channel subfamily J member 9 Neighboring gene potassium inwardly rectifying channel subfamily J member 10 Neighboring gene SLAM family member 9 Neighboring gene 40S ribosomal protein SA-like Neighboring gene immunoglobulin superfamily member 9

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,4-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glycolipid mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of glycosylphosphatidylinositol-mannosyltransferase I complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GPI mannosyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613783.1 Reference CriGri_1.0 Primary Assembly

    Range
    877160..882102
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007640974.4 → XP_007639164.1  GPI mannosyltransferase 1

    See identical proteins and their annotated locations for XP_007639164.1

    UniProtKB/TrEMBL
    G3H7Y9
    Conserved Domains (1) summary
    pfam05007
    Location:140 → 409
    Mannosyl_trans; Mannosyltransferase (PIG-M)

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048598.1 Alternate CriGri-PICRH-1.0

    Range
    20480911..20485853 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027418945.2 → XP_027274746.1  GPI mannosyltransferase 1

    UniProtKB/TrEMBL
    A0A3L7HIK1
    Related
    ENSCGRP00015042723.1, ENSCGRT00015050579.1
Nucleotide Protein Strain
Heading Accession and Version

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