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Slc5a7 solute carrier family 5 member 7 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100764885, updated on 8-Mar-2024

Summary

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Gene symbol
Slc5a7
Gene description
solute carrier family 5 member 7
See related
Ensembl:ENSCGRG00015005540
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
8
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614826.1 (287652..307526)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 1 Unlocalized Scaffold NW_023276807.1 (3610496..3630418, complement)

NW_003614826.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103162602 Neighboring gene replication protein A 32 kDa subunit-like Neighboring gene uncharacterized LOC103162601 Neighboring gene sperm motility kinase-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables choline:sodium symporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in acetylcholine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in choline transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neuromuscular synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synaptic transmission, cholinergic IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in axon IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in dendrite IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in perikaryon IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synapse IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
high affinity choline transporter 1
Names
High affinity choline transporter 1
high affinity choline transporter 1-like protein
solute carrier family 5 (sodium/choline cotransporter), member 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003614826.1 Reference CriGri_1.0 Primary Assembly

    Range
    287652..307526
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003510084.3 → XP_003510132.1  high affinity choline transporter 1

    See identical proteins and their annotated locations for XP_003510132.1

    UniProtKB/TrEMBL
    G3I4F7
    Conserved Domains (1) summary
    cd11474
    Location:8 → 495
    SLC5sbd_CHT; Na(+)- and Cl(-)-dependent choline cotransporter CHT and related proteins; solute-binding domain

Alternate CriGri-PICRH-1.0

Genomic

  1. NW_023276807.1 Alternate CriGri-PICRH-1.0

    Range
    3610496..3630418 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027386685.2 → XP_027242486.1  high affinity choline transporter 1

    UniProtKB/TrEMBL
    G3I4F7
    Related
    ENSCGRP00015007136.1, ENSCGRT00015008763.2
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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