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Abat 4-aminobutyrate aminotransferase [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100765485, updated on 8-Mar-2024

Summary

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Gene symbol
Abat
Gene description
4-aminobutyrate aminotransferase
Locus tag
I79_001777
See related
Ensembl:ENSCGRG00015011807
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 7
Exon count:
15
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613620.1 (1443366..1485711, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 7 NC_048600.1 (38154584..38195482, complement)

NW_003613620.1Genomic Context describing neighboring genes Neighboring gene phosphomannomutase 2 Neighboring gene transmembrane protein 186 Neighboring gene methyltransferase 22, Kin17 lysine Neighboring gene transmembrane protein 114

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 4-aminobutyrate transaminase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in gamma-aminobutyric acid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
4-aminobutyrate aminotransferase, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613620.1 Reference CriGri_1.0 Primary Assembly

    Range
    1443366..1485711 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035460555.1 → XP_035316446.1  4-aminobutyrate aminotransferase, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A8C2MJ46, G3GVN2
    Conserved Domains (1) summary
    cl18945
    Location:34 → 440
    AAT_I; Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the ...

  2. XM_035460552.1 → XP_035316443.1  4-aminobutyrate aminotransferase, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A8C2ME74, G3GVN2
    Conserved Domains (1) summary
    TIGR00699
    Location:34 → 496
    GABAtrns_euk; 4-aminobutyrate aminotransferase, eukaryotic type

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048600.1 Alternate CriGri-PICRH-1.0

    Range
    38154584..38195482 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035447994.1 → XP_035303885.1  4-aminobutyrate aminotransferase, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A8C2MJ46, G3GVN2
    Related
    ENSCGRP00015015516.1, ENSCGRT00015019015.2
    Conserved Domains (1) summary
    cl18945
    Location:34 → 440
    AAT_I; Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the ...

  2. XM_035447992.1 → XP_035303883.1  4-aminobutyrate aminotransferase, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A8C2ME74, G3GVN2
    Related
    ENSCGRP00015015509.1, ENSCGRT00015019010.2
    Conserved Domains (1) summary
    TIGR00699
    Location:34 → 496
    GABAtrns_euk; 4-aminobutyrate aminotransferase, eukaryotic type
Nucleotide Protein Strain
Heading Accession and Version

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