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Slc27a5 solute carrier family 27 member 5 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100765567, updated on 11-Apr-2024

Summary

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Gene symbol
Slc27a5
Gene description
solute carrier family 27 member 5
Locus tag
I79_017702
See related
Ensembl:ENSCGRG00015015088
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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See Slc27a5 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
10
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614721.1 (111090..123432)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 9 NC_048602.1 (25572990..25585258, complement)

NW_003614721.1Genomic Context describing neighboring genes Neighboring gene tripartite motif containing 28 Neighboring gene zinc finger and BTB domain containing 45 Neighboring gene zinc finger protein 446 Neighboring gene zinc finger protein 324

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables fatty acid transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables long-chain fatty acid transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables long-chain fatty acid-CoA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in bile acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ketone body biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in long-chain fatty acid import across plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in triglyceride mobilization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in very long-chain fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: bile acyl-CoA synthetase; bile acyl-CoA synthetase
Names
Bile acyl-CoA synthetase
solute carrier family 27 (fatty acid transporter), member 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003614721.1 Reference CriGri_1.0 Primary Assembly

    Range
    111090..123432
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035460500.1 → XP_035316391.1  LOW QUALITY PROTEIN: bile acyl-CoA synthetase isoform X1

    UniProtKB/TrEMBL
    A0A8C2M8P4
    Conserved Domains (1) summary
    cl17068
    Location:144 → 678
    AFD_class_I; Adenylate forming domain, Class I superfamily

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048602.1 Alternate CriGri-PICRH-1.0

    Range
    25572990..25585258 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027431219.2 → XP_027287020.1  bile acyl-CoA synthetase isoform X2

    UniProtKB/TrEMBL
    A0A8C2M8P4, A0A9J7GKQ3
    Related
    ENSCGRP00015019610.2, ENSCGRT00015024182.2
Nucleotide Protein Strain
Heading Accession and Version

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