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Pipox pipecolic acid and sarcosine oxidase [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100765858, updated on 8-Mar-2024

Summary

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Gene symbol
Pipox
Gene description
pipecolic acid and sarcosine oxidase
Locus tag
I79_019615
See related
Ensembl:ENSCGRG00015016200
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 7
Exon count:
8
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003615038.1 (145046..158259, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 7 NC_048600.1 (91279622..91293051, complement)

NW_003615038.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC118240036 Neighboring gene myosin XVIIIA Neighboring gene uncharacterized LOC118240037 Neighboring gene seizure related 6 homolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-pipecolate oxidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables flavin adenine dinucleotide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sarcosine oxidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in L-lysine catabolic process to acetyl-CoA via L-pipecolate IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
peroxisomal sarcosine oxidase
Names
Peroxisomal sarcosine oxidase
pipecolic acid oxidase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003615038.1 Reference CriGri_1.0 Primary Assembly

    Range
    145046..158259 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003511148.4 → XP_003511196.1  peroxisomal sarcosine oxidase

    See identical proteins and their annotated locations for XP_003511196.1

    UniProtKB/TrEMBL
    A0A3L7GLU6
    Conserved Domains (1) summary
    TIGR01377
    Location:8 → 388
    soxA_mon; sarcosine oxidase, monomeric form

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048600.1 Alternate CriGri-PICRH-1.0

    Range
    91279622..91293051 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027426627.2 → XP_027282428.1  peroxisomal sarcosine oxidase

    UniProtKB/TrEMBL
    A0A3L7GLU6
    Related
    ENSCGRP00015021244.1, ENSCGRT00015026113.2
Nucleotide Protein Strain
Heading Accession and Version

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