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Npl N-acetylneuraminate pyruvate lyase [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100766218, updated on 8-Mar-2024

Summary

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Gene symbol
Npl
Gene description
N-acetylneuraminate pyruvate lyase
Locus tag
I79_009547
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 5
Exon count:
9
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613921.1 (1046742..1071689, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 5 NC_048598.1 (38138572..38178668)

NW_003613921.1Genomic Context describing neighboring genes Neighboring gene DExH-box helicase 9 Neighboring gene 60S ribosomal protein L31-like Neighboring gene regulator of G protein signaling 8 Neighboring gene regulator of G protein signaling 16

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 4-hydroxy-tetrahydrodipicolinate synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables N-acetylneuraminate lyase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acetylneuraminate catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: N-acetylneuraminate lyase
Names
N-acetylneuraminate lyase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613921.1 Reference CriGri_1.0 Primary Assembly

    Range
    1046742..1071689 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035456144.1 → XP_035312035.1  LOW QUALITY PROTEIN: N-acetylneuraminate lyase isoform X1

    UniProtKB/TrEMBL
    A0A8C2M7G8
    Conserved Domains (1) summary
    cl21457
    Location:8 → 258
    TIM; TIM-like beta/alpha barrel domains

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048598.1 Alternate CriGri-PICRH-1.0

    Range
    38138572..38178668
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035445823.1 → XP_035301714.1  LOW QUALITY PROTEIN: N-acetylneuraminate lyase isoform X2

    UniProtKB/TrEMBL
    A0A9J7GXS5
    Conserved Domains (1) summary
    cd00954
    Location:113 → 407
    NAL; N-Acetylneuraminic acid aldolase, also called N-acetylneuraminate lyase (NAL)
Nucleotide Protein Strain
Heading Accession and Version

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