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LOC100766318 pancreatic alpha-amylase [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100766318, updated on 19-Dec-2023

Summary

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Gene symbol
LOC100766318
Gene description
pancreatic alpha-amylase
Locus tag
I79_012706
See related
Ensembl:ENSCGRG00015030948
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
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Genomic context

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Location:
chromosome: 1
Exon count:
10
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614154.1 (1047557..1056463, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 1 Unlocalized Scaffold NW_023276806.1 (44452057..44460967)

NW_003614154.1Genomic Context describing neighboring genes Neighboring gene nuclear pore complex protein Nup54-like Neighboring gene pancreatic alpha-amylase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-amylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cation binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pancreatic alpha-amylase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003614154.1 Reference CriGri_1.0 Primary Assembly

    Range
    1047557..1056463 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003505500.5 → XP_003505548.1  pancreatic alpha-amylase isoform X3

    See identical proteins and their annotated locations for XP_003505548.1

    UniProtKB/TrEMBL
    A0A061ILS3, A0A8C2MDJ9
    Conserved Domains (3) summary
    cd11317
    Location:25 → 413
    AmyAc_bac_euk_AmyA; Alpha amylase catalytic domain found in bacterial and eukaryotic Alpha amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase)
    smart00632
    Location:420 → 507
    Aamy_C; Aamy_C domain
    COG0366
    Location:46 → 344
    AmyA; Glycosidase [Carbohydrate transport and metabolism]

  2. XM_035457795.1 → XP_035313686.1  pancreatic alpha-amylase isoform X2

    UniProtKB/TrEMBL
    A0A9J7H8F5, G3HPJ2
    Conserved Domains (2) summary
    cd11317
    Location:25 → 336
    AmyAc_bac_euk_AmyA; Alpha amylase catalytic domain found in bacterial and eukaryotic Alpha amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase)
    smart00632
    Location:343 → 430
    Aamy_C; Aamy_C domain

  3. XM_035457794.1 → XP_035313685.1  pancreatic alpha-amylase isoform X1

    UniProtKB/TrEMBL
    A0A9J7H8C8, G3HPJ2
    Conserved Domains (2) summary
    cd11317
    Location:25 → 358
    AmyAc_bac_euk_AmyA; Alpha amylase catalytic domain found in bacterial and eukaryotic Alpha amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase)
    smart00632
    Location:365 → 452
    Aamy_C; Aamy_C domain

Alternate CriGri-PICRH-1.0

Genomic

  1. NW_023276806.1 Alternate CriGri-PICRH-1.0

    Range
    44452057..44460967
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027395545.2 → XP_027251346.1  pancreatic alpha-amylase isoform X3

    UniProtKB/TrEMBL
    A0A061ILS3, A0A8C2MDJ9
    Related
    ENSCGRP00015036012.2, ENSCGRT00015043915.2

  2. XM_035451209.1 → XP_035307100.1  pancreatic alpha-amylase isoform X1

    UniProtKB/TrEMBL
    A0A9J7H8C8, G3HPJ2
    Conserved Domains (2) summary
    cd11317
    Location:25 → 358
    AmyAc_bac_euk_AmyA; Alpha amylase catalytic domain found in bacterial and eukaryotic Alpha amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase)
    smart00632
    Location:365 → 452
    Aamy_C; Aamy_C domain

  3. XM_035451210.1 → XP_035307101.1  pancreatic alpha-amylase isoform X2

    UniProtKB/TrEMBL
    A0A9J7H8F5, G3HPJ2
    Conserved Domains (2) summary
    cd11317
    Location:25 → 336
    AmyAc_bac_euk_AmyA; Alpha amylase catalytic domain found in bacterial and eukaryotic Alpha amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase)
    smart00632
    Location:343 → 430
    Aamy_C; Aamy_C domain
Nucleotide Protein Strain
Heading Accession and Version

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