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P4ha3 prolyl 4-hydroxylase subunit alpha 3 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100766769, updated on 8-Mar-2024

Summary

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Gene symbol
P4ha3
Gene description
prolyl 4-hydroxylase subunit alpha 3
See related
Ensembl:ENSCGRG00015014257
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
14
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003616632.1 (14318..48283, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 3 NC_048596.1 (99207197..99240812, complement)

NW_003616632.1Genomic Context describing neighboring genes Neighboring gene protein phosphatase methylesterase 1 Neighboring gene phosphoglucomutase 2 like 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-ascorbic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables procollagen-proline 4-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in peptidyl-proline hydroxylation to 4-hydroxy-L-proline IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: prolyl 4-hydroxylase subunit alpha-3; prolyl 4-hydroxylase subunit alpha-3
Names
procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha polypeptide III
prolyl 4-hydroxylase, alpha polypeptide III

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003616632.1 Reference CriGri_1.0 Primary Assembly

    Range
    14318..48283 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035437851.1 → XP_035293742.1  prolyl 4-hydroxylase subunit alpha-3 isoform X3

    Conserved Domains (2) summary
    smart00702
    Location:353 → 525
    P4Hc; Prolyl 4-hydroxylase alpha subunit homologues
    pfam08336
    Location:34 → 108
    P4Ha_N; Prolyl 4-Hydroxylase alpha-subunit, N-terminal region

  2. XM_035437850.1 → XP_035293741.1  prolyl 4-hydroxylase subunit alpha-3 isoform X2

    UniProtKB/TrEMBL
    A0A8C2QLU5
    Conserved Domains (2) summary
    smart00702
    Location:356 → 528
    P4Hc; Prolyl 4-hydroxylase alpha subunit homologues
    pfam08336
    Location:34 → 108
    P4Ha_N; Prolyl 4-Hydroxylase alpha-subunit, N-terminal region

  3. XM_007654587.3 → XP_007652777.2  prolyl 4-hydroxylase subunit alpha-3 isoform X1

    UniProtKB/TrEMBL
    A0A8C2QLU5
    Conserved Domains (2) summary
    smart00702
    Location:356 → 528
    P4Hc; Prolyl 4-hydroxylase alpha subunit homologues
    pfam08336
    Location:34 → 108
    P4Ha_N; Prolyl 4-Hydroxylase alpha-subunit, N-terminal region

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048596.1 Alternate CriGri-PICRH-1.0

    Range
    99207197..99240812 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027407497.2 → XP_027263298.1  LOW QUALITY PROTEIN: prolyl 4-hydroxylase subunit alpha-3 isoform X4

    UniProtKB/TrEMBL
    A0A9J7FPW3
    Related
    ENSCGRP00015018522.1, ENSCGRT00015022800.2
Nucleotide Protein Strain
Heading Accession and Version

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