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LOC100766960 beta-hexosaminidase subunit beta [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100766960, updated on 19-Dec-2023

Summary

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Gene symbol
LOC100766960
Gene description
beta-hexosaminidase subunit beta
Locus tag
I79_025215
See related
Ensembl:ENSCGRG00015032152
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
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Genomic context

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Location:
chromosome: 2
Exon count:
13
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003618590.1 (2497..26348, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 2 NC_048595.1 (315853782..315878927, complement)

NW_003618590.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC118238060

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-N-acetylhexosaminidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ganglioside catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycosaminoglycan metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-hexosaminidase subunit beta

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003618590.1 Reference CriGri_1.0 Primary Assembly

    Range
    2497..26348 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035438388.1 → XP_035294279.1  beta-hexosaminidase subunit beta isoform X1

    UniProtKB/TrEMBL
    A0A8C2MQK0
    Conserved Domains (2) summary
    cd06562
    Location:181 → 492
    GH20_HexA_HexB-like; Beta-N-acetylhexosaminidases catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. The hexA and hexB genes encode the ...
    pfam14845
    Location:37 → 159
    Glycohydro_20b2; beta-acetyl hexosaminidase like

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048595.1 Alternate CriGri-PICRH-1.0

    Range
    315853782..315878927 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027401668.2 → XP_027257469.1  beta-hexosaminidase subunit beta isoform X2

    UniProtKB/TrEMBL
    A0A8C2MQK0, A0A9J7FHE6
    Related
    ENSCGRP00015011915.2, ENSCGRT00015014606.2

  2. XM_035440511.1 → XP_035296402.1  beta-hexosaminidase subunit beta isoform X3

    UniProtKB/TrEMBL
    A0A9J7GRP1
    Conserved Domains (1) summary
    cd06562
    Location:1 → 315
    GH20_HexA_HexB-like; Beta-N-acetylhexosaminidases catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. The hexA and hexB genes encode the ...
Nucleotide Protein Strain
Heading Accession and Version

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