U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC100767001 pancreatic alpha-amylase [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100767001, updated on 19-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC100767001
Gene description
pancreatic alpha-amylase
Locus tag
I79_012707
See related
Ensembl:ENSCGRG00015030903
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 1
Exon count:
10
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614154.1 (1087347..1098800, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 1 Unlocalized Scaffold NW_023276806.1 (44343786..44421165)

NW_003614154.1Genomic Context describing neighboring genes Neighboring gene nuclear pore complex protein Nup54-like Neighboring gene pancreatic alpha-amylase

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-amylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cation binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
pancreatic alpha-amylase

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003614154.1 Reference CriGri_1.0 Primary Assembly

    Range
    1087347..1098800 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035457793.1 → XP_035313684.1  pancreatic alpha-amylase

    UniProtKB/TrEMBL
    A0A061ILS3, A0A8C2MJ06
    Conserved Domains (3) summary
    cd11317
    Location:25 → 413
    AmyAc_bac_euk_AmyA; Alpha amylase catalytic domain found in bacterial and eukaryotic Alpha amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase)
    smart00632
    Location:420 → 507
    Aamy_C; Aamy_C domain
    cl38930
    Location:82 → 165
    AmyAc_family; Alpha amylase catalytic domain family

Alternate CriGri-PICRH-1.0

Genomic

  1. NW_023276806.1 Alternate CriGri-PICRH-1.0

    Range
    44343786..44421165
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027395550.2 → XP_027251351.1  pancreatic alpha-amylase

    UniProtKB/TrEMBL
    A0A061ILS3, A0A8C2MJ06
    Conserved Domains (3) summary
    cd11317
    Location:25 → 413
    AmyAc_bac_euk_AmyA; Alpha amylase catalytic domain found in bacterial and eukaryotic Alpha amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase)
    smart00632
    Location:420 → 507
    Aamy_C; Aamy_C domain
    cl38930
    Location:82 → 165
    AmyAc_family; Alpha amylase catalytic domain family

  2. XM_027395551.2 → XP_027251352.1  pancreatic alpha-amylase

    UniProtKB/TrEMBL
    A0A061ILS3, A0A8C2MJ06
    Related
    ENSCGRP00015043359.1, ENSCGRT00015067771.1
    Conserved Domains (3) summary
    cd11317
    Location:25 → 413
    AmyAc_bac_euk_AmyA; Alpha amylase catalytic domain found in bacterial and eukaryotic Alpha amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase)
    smart00632
    Location:420 → 507
    Aamy_C; Aamy_C domain
    cl38930
    Location:82 → 165
    AmyAc_family; Alpha amylase catalytic domain family
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases