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Nt5m 5',3'-nucleotidase, mitochondrial [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100767091, updated on 8-Mar-2024

Summary

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Gene symbol
Nt5m
Gene description
5',3'-nucleotidase, mitochondrial
Locus tag
I79_010150
See related
Ensembl:ENSCGRG00015029025
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See Nt5m in Genome Data Viewer
Location:
chromosome: 7
Exon count:
5
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613960.1 (1149148..1163042)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 7 NC_048600.1 (73968774..73987634)

NW_003613960.1Genomic Context describing neighboring genes Neighboring gene COP9 signalosome subunit 3 Neighboring gene U1 spliceosomal RNA Neighboring gene uncharacterized LOC103160645 Neighboring gene mediator complex subunit 9 Neighboring gene ras related dexamethasone induced 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 5'-nucleotidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in pyrimidine deoxyribonucleotide catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
5'(3')-deoxyribonucleotidase, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613960.1 Reference CriGri_1.0 Primary Assembly

    Range
    1149148..1163042
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035456472.1 → XP_035312363.1  5'(3')-deoxyribonucleotidase, mitochondrial isoform X1

    Conserved Domains (1) summary
    cl21460
    Location:5 → 90
    HAD_like; Haloacid Dehalogenase-like Hydrolases

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048600.1 Alternate CriGri-PICRH-1.0

    Range
    73968774..73987634
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027427317.2 → XP_027283118.1  5'(3')-deoxyribonucleotidase, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A8C2LD69
    Related
    ENSCGRP00015049948.1, ENSCGRT00015067453.1

  2. XM_027427318.2 → XP_027283119.1  5'(3')-deoxyribonucleotidase, mitochondrial isoform X3

    UniProtKB/TrEMBL
    A0A8C2QCF2
    Related
    ENSCGRP00015044380.1, ENSCGRT00015051324.1

  3. XM_035447831.1 → XP_035303722.1  5'(3')-deoxyribonucleotidase, mitochondrial isoform X4

    UniProtKB/TrEMBL
    A0A9J7KBQ2
    Conserved Domains (1) summary
    cd02587
    Location:29 → 186
    HAD_5-3dNT; 5'(3')-deoxyribonucleotidase

  4. XM_035447832.1 → XP_035303723.1  5'(3')-deoxyribonucleotidase, mitochondrial isoform X5

    UniProtKB/TrEMBL
    A0A9J7H5W3
    Conserved Domains (1) summary
    cd02587
    Location:29 → 178
    HAD_5-3dNT; 5'(3')-deoxyribonucleotidase
Nucleotide Protein Strain
Heading Accession and Version

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