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Pigb phosphatidylinositol glycan anchor biosynthesis class B [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100768002, updated on 8-Mar-2024

Summary

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Gene symbol
Pigb
Gene description
phosphatidylinositol glycan anchor biosynthesis class B
Locus tag
I79_000149
See related
Ensembl:ENSCGRG00015015845
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
15
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613582.1 (3366937..3388893)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 4 NC_048597.1 (184456184..184478122, complement)

NW_003613582.1Genomic Context describing neighboring genes Neighboring gene KH domain containing 3 like, subcortical maternal complex member Neighboring gene RAB27A, member RAS oncogene family Neighboring gene U6 spliceosomal RNA Neighboring gene cell cycle progression 1 Neighboring gene microRNA mir-628 Neighboring gene piercer of microtubule wall 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,2-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GPI mannosyltransferase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613582.1 Reference CriGri_1.0 Primary Assembly

    Range
    3366937..3388893
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016977940.3 → XP_016833429.1  GPI mannosyltransferase 3 isoform X1

    UniProtKB/TrEMBL
    A0A9J7FTZ9
    Conserved Domains (1) summary
    cl21590
    Location:52 → 582
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

  2. XM_027439672.2 → XP_027295473.1  GPI mannosyltransferase 3 isoform X2

    UniProtKB/TrEMBL
    A0A8C2MLW5

  3. XM_007646820.4 → XP_007645010.1  GPI mannosyltransferase 3 isoform X1

    See identical proteins and their annotated locations for XP_007645010.1

    UniProtKB/TrEMBL
    A0A9J7FTZ9
    Conserved Domains (1) summary
    cl21590
    Location:52 → 582
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

  4. XM_035459788.1 → XP_035315679.1  GPI mannosyltransferase 3 isoform X3

    UniProtKB/TrEMBL
    A0A9J7GYF2
    Conserved Domains (1) summary
    cl21590
    Location:2 → 497
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

  5. XM_016977976.3 → XP_016833465.1  GPI mannosyltransferase 3 isoform X3

    UniProtKB/TrEMBL
    A0A9J7GYF2
    Conserved Domains (1) summary
    cl21590
    Location:2 → 497
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

  6. XM_035459811.1 → XP_035315702.1  GPI mannosyltransferase 3 isoform X4

    UniProtKB/TrEMBL
    A0A9J7GW35, G3GRK1
    Conserved Domains (1) summary
    cl21590
    Location:9 → 432
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048597.1 Alternate CriGri-PICRH-1.0

    Range
    184456184..184478122 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027411171.2 → XP_027266972.1  GPI mannosyltransferase 3 isoform X1

    UniProtKB/TrEMBL
    A0A9J7FTZ9

  2. XM_027411173.2 → XP_027266974.1  GPI mannosyltransferase 3 isoform X2

    UniProtKB/TrEMBL
    A0A8C2MLW5
    Related
    ENSCGRP00015020760.1, ENSCGRT00015025536.2

  3. XM_027411172.2 → XP_027266973.1  GPI mannosyltransferase 3 isoform X1

    UniProtKB/TrEMBL
    A0A9J7FTZ9

  4. XM_027411174.2 → XP_027266975.1  GPI mannosyltransferase 3 isoform X3

    UniProtKB/TrEMBL
    A0A9J7GYF2
    Conserved Domains (1) summary
    cl21590
    Location:2 → 497
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

  5. XM_035443805.1 → XP_035299696.1  GPI mannosyltransferase 3 isoform X3

    UniProtKB/TrEMBL
    A0A9J7GYF2
    Conserved Domains (1) summary
    cl21590
    Location:2 → 497
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

  6. XM_035443806.1 → XP_035299697.1  GPI mannosyltransferase 3 isoform X4

    UniProtKB/TrEMBL
    A0A9J7GW35, G3GRK1
    Conserved Domains (1) summary
    cl21590
    Location:9 → 432
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase
Nucleotide Protein Strain
Heading Accession and Version

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