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Pdxk pyridoxal kinase [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100768396, updated on 8-Mar-2024

Summary

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Gene symbol
Pdxk
Gene description
pyridoxal kinase
See related
Ensembl:ENSCGRG00015022403
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
11
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003617297.1 (14210..34818)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 1 Unlocalized Scaffold NW_023276806.1 (260403069..260428518)

NW_003617297.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103164565 Neighboring gene uncharacterized LOC118238010 Neighboring gene cystatin B Neighboring gene ribosomal RNA processing 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables pyridoxal kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in pyridoxal 5'-phosphate salvage IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pyridoxal kinase
Names
pyridoxal (pyridoxine, vitamin B6) kinase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003617297.1 Reference CriGri_1.0 Primary Assembly

    Range
    14210..34818
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003515066.5 → XP_003515114.1  pyridoxal kinase

    See identical proteins and their annotated locations for XP_003515114.1

    UniProtKB/TrEMBL
    A0A8C2MFH4, G3IKQ5
    Conserved Domains (1) summary
    cl00192
    Location:6 → 304
    ribokinase_pfkB_like; ribokinase/pfkB superfamily: Kinases that accept a wide variety of substrates, including carbohydrates and aromatic small molecules, all are phosphorylated at a hydroxyl group. The superfamily includes ribokinase, fructokinase, ketohexokinase, ...

Alternate CriGri-PICRH-1.0

Genomic

  1. NW_023276806.1 Alternate CriGri-PICRH-1.0

    Range
    260403069..260428518
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027394357.2 → XP_027250158.1  pyridoxal kinase

    UniProtKB/TrEMBL
    A0A3L7IG66, A0A8C2MFH4
    Related
    ENSCGRP00015029866.2, ENSCGRT00015036509.2
Nucleotide Protein Strain
Heading Accession and Version

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