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Ppcs phosphopantothenoylcysteine synthetase [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100768962, updated on 8-Mar-2024

Summary

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Gene symbol
Ppcs
Gene description
phosphopantothenoylcysteine synthetase
See related
Ensembl:ENSCGRG00015002816
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2
Exon count:
3
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003615864.1 (175921..179610, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 2 NC_048595.1 (32754686..32758295)

NW_003615864.1Genomic Context describing neighboring genes Neighboring gene peptidylprolyl isomerase H Neighboring gene uncharacterized LOC103160683 Neighboring gene coiled-coil domain containing 30 Neighboring gene coiled-coil domain-containing protein 30-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphopantothenate--cysteine ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in coenzyme A biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphopantothenate--cysteine ligase
Names
Phosphopantothenate--cysteine ligase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003615864.1 Reference CriGri_1.0 Primary Assembly

    Range
    175921..179610 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003513331.5 → XP_003513379.1  phosphopantothenate--cysteine ligase isoform X1

    See identical proteins and their annotated locations for XP_003513379.1

    UniProtKB/TrEMBL
    G3IEX5
    Conserved Domains (1) summary
    cl27193
    Location:14 → 301
    DFP; DNA / pantothenate metabolism flavoprotein

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048595.1 Alternate CriGri-PICRH-1.0

    Range
    32754686..32758295
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035439660.1 → XP_035295551.1  phosphopantothenate--cysteine ligase isoform X2

    UniProtKB/TrEMBL
    A0A9J7K310
    Conserved Domains (1) summary
    PRK05579
    Location:5 → 128
    PRK05579; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

  2. XM_027399114.2 → XP_027254915.1  phosphopantothenate--cysteine ligase isoform X1

    UniProtKB/TrEMBL
    G3IEX5
    Related
    ENSCGRP00015053993.1, ENSCGRT00015048007.1

  3. XM_027399115.2 → XP_027254916.1  phosphopantothenate--cysteine ligase isoform X3

    UniProtKB/TrEMBL
    A0A9J7FC35
Nucleotide Protein Strain
Heading Accession and Version

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