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Slc12a2 solute carrier family 12 member 2 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100769027, updated on 8-Mar-2024

Summary

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Gene symbol
Slc12a2
Gene description
solute carrier family 12 member 2
Locus tag
I79_017861
See related
Ensembl:ENSCGRG00015008046
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See Slc12a2 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
27
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614749.1 (50114..122015)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 2 NC_048595.1 (181027191..181102501, complement)

NW_003614749.1Genomic Context describing neighboring genes Neighboring gene histone-binding protein RBBP4-like Neighboring gene fibrillin 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ammonium transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sodium:potassium:chloride symporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell volume homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chloride ion homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chloride transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in potassium ion homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in potassium ion import across plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sodium ion homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sodium ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: solute carrier family 12 member 2; solute carrier family 12 member 2
Names
solute carrier family 12 (sodium/potassium/chloride transporter), member 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003614749.1 Reference CriGri_1.0 Primary Assembly

    Range
    50114..122015
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007650285.2 → XP_007648475.2  LOW QUALITY PROTEIN: solute carrier family 12 member 2 isoform X1

    Conserved Domains (1) summary
    TIGR00930
    Location:201 → 1179
    2a30; K-Cl cotransporter

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048595.1 Alternate CriGri-PICRH-1.0

    Range
    181027191..181102501 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035440139.1 → XP_035296030.1  solute carrier family 12 member 2 isoform X3

    UniProtKB/TrEMBL
    A0A9J7GP74
    Related
    ENSCGRP00015010688.1, ENSCGRT00015013109.2
    Conserved Domains (1) summary
    TIGR00930
    Location:201 → 1163
    2a30; K-Cl cotransporter

  2. XM_027400937.2 → XP_027256738.1  solute carrier family 12 member 2 isoform X2

    UniProtKB/TrEMBL
    A0A8C2MVG7
    Related
    ENSCGRP00015010608.1, ENSCGRT00015013020.2
Nucleotide Protein Strain
Heading Accession and Version

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