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Pygb glycogen phosphorylase B [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100769186, updated on 8-Mar-2024

Summary

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Gene symbol
Pygb
Gene description
glycogen phosphorylase B
Locus tag
I79_006118
See related
Ensembl:ENSCGRG00015004961
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 6
Exon count:
19
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613762.1 (845435..876303, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 6 NC_048599.1 (28869655..28918610, complement)

NW_003613762.1Genomic Context describing neighboring genes Neighboring gene histone deacetylase 1-like Neighboring gene GINS complex subunit 1 Neighboring gene abhydrolase domain containing 12, lysophospholipase Neighboring gene 40S ribosomal protein S2-like Neighboring gene ectonucleoside triphosphate diphosphohydrolase 6 Neighboring gene visual system homeobox 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycogen phosphorylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycogen catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycogen phosphorylase, brain form
Names
Glycogen phosphorylase, brain form
brain glycogen phosphorylase
phosphorylase, glycogen; brain

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613762.1 Reference CriGri_1.0 Primary Assembly

    Range
    845435..876303 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016974436.3 → XP_016829925.1  glycogen phosphorylase, brain form isoform X1

    UniProtKB/TrEMBL
    G3H6Z4
    Conserved Domains (2) summary
    cd04300
    Location:1 → 737
    GT1_Glycogen_Phosphorylase; This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of ...
    TIGR02093
    Location:1 → 737
    P_ylase; glycogen/starch/alpha-glucan phosphorylases

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048599.1 Alternate CriGri-PICRH-1.0

    Range
    28869655..28918610 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027421556.1 → XP_027277357.1  glycogen phosphorylase, brain form isoform X2

    UniProtKB/TrEMBL
    A0A3L7HE11
    Related
    ENSCGRP00015006442.1, ENSCGRT00015007926.2
Nucleotide Protein Strain
Heading Accession and Version

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