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LOC100769497 platelet-activating factor acetylhydrolase [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100769497, updated on 19-Dec-2023

Summary

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Gene symbol
LOC100769497
Gene description
platelet-activating factor acetylhydrolase
See related
Ensembl:ENSCGRG00015006052
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Also known as
Pla2g7
Annotation information
Annotation category: partial on reference assembly
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Genomic context

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Location:
chromosome: 1
Exon count:
9
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614278.1 (868789..901172)
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614784.1 (493827..494753, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 1 Unlocalized Scaffold NW_023276807.1 (29878486..29916837)

NW_003614784.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 25 member 27 Neighboring gene tudor domain containing 6

NW_003614278.1Genomic Context describing neighboring genes Neighboring gene meprin A subunit alpha Neighboring gene ankyrin repeat domain 66

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1-alkyl-2-acetylglycerophosphocholine esterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
platelet-activating factor acetylhydrolase
Names
phospholipase A2 group VII
phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003614278.1 Reference CriGri_1.0 Primary Assembly

    Range
    868789..901172
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007647281.4 → XP_007645471.1  platelet-activating factor acetylhydrolase isoform X1

    See identical proteins and their annotated locations for XP_007645471.1

    UniProtKB/TrEMBL
    A0A8C2M2A7
    Conserved Domains (1) summary
    pfam03403
    Location:50 → 415
    PAF-AH_p_II; Platelet-activating factor acetylhydrolase, isoform II

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003614784.1 Reference CriGri_1.0 Primary Assembly

    Range
    493827..494753 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007650510.1 → XP_007648700.1  platelet-activating factor acetylhydrolase isoform X2

    Conserved Domains (1) summary
    cl21494
    Location:1 → 118
    Abhydrolase; alpha/beta hydrolases

Alternate CriGri-PICRH-1.0

Genomic

  1. NW_023276807.1 Alternate CriGri-PICRH-1.0

    Range
    29878486..29916837
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035452990.1 → XP_035308881.1  platelet-activating factor acetylhydrolase isoform X4

    UniProtKB/TrEMBL
    A0A9J7HEG5
    Conserved Domains (1) summary
    cl21494
    Location:50 → 358
    Abhydrolase; alpha/beta hydrolases

  2. XM_027387451.2 → XP_027243252.1  platelet-activating factor acetylhydrolase isoform X3

    UniProtKB/TrEMBL
    A0A8C2M2A7
    Related
    ENSCGRP00015007739.1, ENSCGRT00015009545.2
Nucleotide Protein Strain
Heading Accession and Version

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