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Gys1 glycogen synthase 1 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100769788, updated on 8-Mar-2024

Summary

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Gene symbol
Gys1
Gene description
glycogen synthase 1
Locus tag
I79_016645
See related
Ensembl:ENSCGRG00015017238
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 6
Exon count:
17
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614570.1 (291501..309951, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 6 NC_048599.1 (154345086..154364493)

NW_003614570.1Genomic Context describing neighboring genes Neighboring gene BCL2 associated X, apoptosis regulator Neighboring gene ferritin light chain Neighboring gene RuvB like AAA ATPase 2 Neighboring gene luteinizing hormone subunit beta

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycogen (starch) synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycogen biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycogen [starch] synthase, muscle
Names
glycogen synthase 1 (muscle)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003614570.1 Reference CriGri_1.0 Primary Assembly

    Range
    291501..309951 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003508637.5 → XP_003508685.1  glycogen [starch] synthase, muscle

    UniProtKB/TrEMBL
    A0A8C2MXQ8
    Conserved Domains (3) summary
    cd03793
    Location:26 → 615
    GT1_Glycogen_synthase_GSY2_like; Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the ...
    pfam05693
    Location:31 → 663
    Glycogen_syn; Glycogen synthase
    pfam15151
    Location:645 → 732
    RGCC; Response gene to complement 32 protein family

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048599.1 Alternate CriGri-PICRH-1.0

    Range
    154345086..154364493
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027420631.2 → XP_027276432.1  glycogen [starch] synthase, muscle

    UniProtKB/TrEMBL
    A0A061I228, A0A8C2MXQ8
    Related
    ENSCGRP00015022734.1, ENSCGRT00015027896.2

RNA

  1. XR_004770624.1 RNA Sequence

Nucleotide Protein Strain
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