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Pafah2 platelet activating factor acetylhydrolase 2 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100770286, updated on 8-Mar-2024

Summary

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Gene symbol
Pafah2
Gene description
platelet activating factor acetylhydrolase 2
Locus tag
I79_017951
See related
Ensembl:ENSCGRG00015018257
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2
Exon count:
13
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614761.1 (413313..439340)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 2 NC_048595.1 (18879116..18904980, complement)

NW_003614761.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 30 member 2 Neighboring gene exostosin like glycosyltransferase 1 Neighboring gene stathmin 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1-alkyl-2-acetylglycerophosphocholine esterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
platelet-activating factor acetylhydrolase 2, cytoplasmic
Names
Platelet-activating factor acetylhydrolase 2, cytoplasmic
platelet-activating factor acetylhydrolase 2, 40kDa

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003614761.1 Reference CriGri_1.0 Primary Assembly

    Range
    413313..439340
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016979380.3 → XP_016834869.1  platelet-activating factor acetylhydrolase 2, cytoplasmic isoform X1

    UniProtKB/TrEMBL
    A0A8C2N4F7
    Conserved Domains (1) summary
    pfam03403
    Location:1 → 363
    PAF-AH_p_II; Platelet-activating factor acetylhydrolase, isoform II

  2. XM_027441662.2 → XP_027297463.1  platelet-activating factor acetylhydrolase 2, cytoplasmic isoform X3

    UniProtKB/TrEMBL
    A0A8C2N4F7

  3. XM_016979381.3 → XP_016834870.1  platelet-activating factor acetylhydrolase 2, cytoplasmic isoform X2

    UniProtKB/TrEMBL
    A0A8C2N3Q2, A0A8C2N4F7
    Conserved Domains (1) summary
    pfam03403
    Location:1 → 380
    PAF-AH_p_II; Platelet-activating factor acetylhydrolase, isoform II

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048595.1 Alternate CriGri-PICRH-1.0

    Range
    18879116..18904980 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027399637.2 → XP_027255438.1  platelet-activating factor acetylhydrolase 2, cytoplasmic isoform X2

    UniProtKB/TrEMBL
    A0A8C2N4F7, A0A9J7J8R6
    Related
    ENSCGRP00015040305.1, ENSCGRT00015062989.1

  2. XM_027399639.2 → XP_027255440.1  platelet-activating factor acetylhydrolase 2, cytoplasmic isoform X3

    UniProtKB/TrEMBL
    A0A8C2N4F7, A0A9J7JEA4
    Related
    ENSCGRP00015024019.2, ENSCGRT00015029454.2

  3. XM_027399636.2 → XP_027255437.1  platelet-activating factor acetylhydrolase 2, cytoplasmic isoform X1

    UniProtKB/TrEMBL
    A0A8C2N4F7, A0A9J7FD21
    Related
    ENSCGRP00015059870.1, ENSCGRT00015078224.1
Nucleotide Protein Strain
Heading Accession and Version

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