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Atp5f1a ATP synthase F1 subunit alpha [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100770431, updated on 8-Mar-2024

Summary

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Gene symbol
Atp5f1a
Gene description
ATP synthase F1 subunit alpha
Locus tag
I79_007391
See related
Ensembl:ENSCGRG00015025233
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Also known as
Atp5a1
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2
Exon count:
11
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613828.1 (1592325..1599540)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 2 NC_048595.1 (162253439..162262773, complement)

NW_003613828.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC113839198 Neighboring gene HAUS augmin like complex subunit 1 Neighboring gene proline-serine-threonine phosphatase interacting protein 2 Neighboring gene ectopic P-granules 5 autophagy tethering factor

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ADP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables proton-transporting ATP synthase activity, rotational mechanism IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proton motive force-driven ATP synthesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proton transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of mitochondrial proton-transporting ATP synthase, catalytic core IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of proton-transporting ATP synthase complex, catalytic core F(1) IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ATP synthase subunit alpha, mitochondrial; LOW QUALITY PROTEIN: ATP synthase subunit alpha, mitochondrial
Names
ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613828.1 Reference CriGri_1.0 Primary Assembly

    Range
    1592325..1599540
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007641746.2 → XP_007639936.1  LOW QUALITY PROTEIN: ATP synthase subunit alpha, mitochondrial isoform X1

    Conserved Domains (4) summary
    PRK09281
    Location:49 → 556
    PRK09281; F0F1 ATP synthase subunit alpha; Validated
    cd01132
    Location:137 → 421
    F1_ATPase_alpha; F1 ATP synthase alpha, central domain. The F-ATPase is found in bacterial plasma membranes, mitochondrial inner membranes and in chloroplast thylakoid membranes. It has also been found in the archaea Methanosarcina barkeri. It uses a proton gradient to ...
    pfam00306
    Location:430 → 521
    ATP-synt_ab_C; ATP synthase alpha/beta chain, C terminal domain
    pfam02874
    Location:69 → 135
    ATP-synt_ab_N; ATP synthase alpha/beta family, beta-barrel domain

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048595.1 Alternate CriGri-PICRH-1.0

    Range
    162253439..162262773 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027397952.2 → XP_027253753.1  ATP synthase subunit alpha, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A061ICE4
    Related
    ENSCGRP00015033473.1, ENSCGRT00015040831.2
Nucleotide Protein Strain
Heading Accession and Version

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