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Csgalnact2 chondroitin sulfate N-acetylgalactosaminyltransferase 2 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100770830, updated on 8-Mar-2024

Summary

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Gene symbol
Csgalnact2
Gene description
chondroitin sulfate N-acetylgalactosaminyltransferase 2
See related
Ensembl:ENSCGRG00015006105
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 8
Exon count:
10
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614048.1 (450796..483525)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 8 NC_048601.1 (26766002..26802198)

NW_003614048.1Genomic Context describing neighboring genes Neighboring gene BMS1 ribosome biogenesis factor Neighboring gene ret proto-oncogene Neighboring gene RasGEF domain family member 1A Neighboring gene uncharacterized LOC107978184

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chondroitin sulfate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi cisterna membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chondroitin sulfate N-acetylgalactosaminyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003614048.1 Reference CriGri_1.0 Primary Assembly

    Range
    450796..483525
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035457056.1 → XP_035312947.1  chondroitin sulfate N-acetylgalactosaminyltransferase 2

    UniProtKB/TrEMBL
    A0A3L7H8K7
    Conserved Domains (1) summary
    cl11394
    Location:140 → 516
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

RNA

  1. XR_004773782.1 RNA Sequence

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048601.1 Alternate CriGri-PICRH-1.0

    Range
    26766002..26802198
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027429247.2 → XP_027285048.1  chondroitin sulfate N-acetylgalactosaminyltransferase 2

    UniProtKB/TrEMBL
    A0A3L7H8K7
    Conserved Domains (1) summary
    cl11394
    Location:140 → 516
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  2. XM_027429249.2 → XP_027285050.1  chondroitin sulfate N-acetylgalactosaminyltransferase 2

    UniProtKB/TrEMBL
    A0A3L7H8K7
    Related
    ENSCGRP00015007826.1, ENSCGRT00015009654.2
    Conserved Domains (1) summary
    cl11394
    Location:140 → 516
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  3. XM_035448629.1 → XP_035304520.1  chondroitin sulfate N-acetylgalactosaminyltransferase 2

    UniProtKB/TrEMBL
    A0A3L7H8K7
    Conserved Domains (1) summary
    cl11394
    Location:140 → 516
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  4. XM_027429248.2 → XP_027285049.1  chondroitin sulfate N-acetylgalactosaminyltransferase 2

    UniProtKB/TrEMBL
    A0A3L7H8K7
    Conserved Domains (1) summary
    cl11394
    Location:140 → 516
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

RNA

  1. XR_003487641.2 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

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