U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC100773433 peroxisomal succinyl-coenzyme A thioesterase [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100773433, updated on 25-Jan-2024

Summary

Go to the top of the page Help
Gene symbol
LOC100773433
Gene description
peroxisomal succinyl-coenzyme A thioesterase
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Also known as
Acot4
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 5
Exon count:
8
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614123.1 (564665..587108)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 5 NC_048598.1 (119748175..119751990, complement) , (119728877..119735186, complement)

NW_003614123.1Genomic Context describing neighboring genes Neighboring gene HEAT repeat containing 4 Neighboring gene acyl-coenzyme A thioesterase 1 Neighboring gene 40S ribosomal protein S15-like Neighboring gene acyl-coenzyme A thioesterase 1 Neighboring gene acyl-coenzyme A thioesterase 5

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables fatty acyl-CoA hydrolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in acyl-CoA metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
acyl-coenzyme A thioesterase 1; peroxisomal succinyl-coenzyme A thioesterase
Names
acyl-CoA thioesterase 4
acyl-coenzyme A thioesterase 4

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003614123.1 Reference CriGri_1.0 Primary Assembly

    Range
    564665..587108
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027438501.2 → XP_027294302.1  acyl-coenzyme A thioesterase 1 isoform X2

    UniProtKB/TrEMBL
    A0A8C2LW48

  2. XM_035457621.1 → XP_035313512.1  peroxisomal succinyl-coenzyme A thioesterase isoform X4

    Conserved Domains (2) summary
    pfam04775
    Location:16 → 123
    Bile_Hydr_Trans; Acyl-CoA thioester hydrolase/BAAT N-terminal region
    pfam08840
    Location:211 → 418
    BAAT_C; BAAT / Acyl-CoA thioester hydrolase C terminal

  3. XM_003505128.4 → XP_003505176.1  peroxisomal succinyl-coenzyme A thioesterase isoform X5

    Conserved Domains (2) summary
    pfam04775
    Location:17 → 123
    Bile_Hydr_Trans; Acyl-CoA thioester hydrolase/BAAT N-terminal region
    pfam08840
    Location:211 → 418
    BAAT_C; BAAT / Acyl-CoA thioester hydrolase C terminal

  4. XM_035457620.1 → XP_035313511.1  peroxisomal succinyl-coenzyme A thioesterase isoform X3

    Conserved Domains (2) summary
    pfam04775
    Location:16 → 123
    Bile_Hydr_Trans; Acyl-CoA thioester hydrolase/BAAT N-terminal region
    pfam08840
    Location:210 → 417
    BAAT_C; BAAT / Acyl-CoA thioester hydrolase C terminal

  5. XM_003505129.5 → XP_003505177.2  acyl-coenzyme A thioesterase 1 isoform X1

    See identical proteins and their annotated locations for XP_003505177.2

    UniProtKB/TrEMBL
    A0A8C2LW48, G3HNG5
    Conserved Domains (3) summary
    pfam04775
    Location:60 → 180
    Bile_Hydr_Trans; Acyl-CoA thioester hydrolase/BAAT N-terminal region
    pfam08840
    Location:246 → 453
    BAAT_C; BAAT / Acyl-CoA thioester hydrolase C terminal
    cl21494
    Location:188 → 300
    Abhydrolase; alpha/beta hydrolases

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048598.1 Alternate CriGri-PICRH-1.0

    Range
    119728877..119735186 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

  2. NC_048598.1 Alternate CriGri-PICRH-1.0

    Range
    119748175..119751990 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027418467.1 → XP_027274268.1  acyl-coenzyme A thioesterase 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C2LW48, A0A9J7G2F0
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.