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Atp6v1c1 ATPase H+ transporting V1 subunit C1 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100773930, updated on 8-Mar-2024

Summary

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Gene symbol
Atp6v1c1
Gene description
ATPase H+ transporting V1 subunit C1
See related
Ensembl:ENSCGRG00015027252
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 10
Exon count:
12
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614776.1 (183246..202754, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 10 NC_048603.1 (13081367..13116489, complement)

NW_003614776.1Genomic Context describing neighboring genes Neighboring gene BAALC binder of MAP3K1 and KLF4 Neighboring gene uncharacterized LOC113837393 Neighboring gene uncharacterized LOC118239363 Neighboring gene uncharacterized LOC118239371

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables proton-transporting ATPase activity, rotational mechanism IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proton transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in lysosomal membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of vacuolar proton-transporting V-type ATPase, V1 domain IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
V-type proton ATPase subunit C 1
Names
ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1
ATPase, H+ transporting, lysosomal V1 subunit C1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003614776.1 Reference CriGri_1.0 Primary Assembly

    Range
    183246..202754 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003509829.4 → XP_003509877.1  V-type proton ATPase subunit C 1

    See identical proteins and their annotated locations for XP_003509877.1

    UniProtKB/TrEMBL
    G3I3N5
    Conserved Domains (2) summary
    cd14785
    Location:56 → 76
    V-ATPase_C; 3-helical coiled coil [structural motif]
    pfam03223
    Location:5 → 370
    V-ATPase_C; V-ATPase subunit C

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048603.1 Alternate CriGri-PICRH-1.0

    Range
    13081367..13116489 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027431367.2 → XP_027287168.1  V-type proton ATPase subunit C 1

    UniProtKB/TrEMBL
    A0A8C2MPF3
    Related
    ENSCGRP00015036366.1, ENSCGRT00015044333.2

  2. XM_027431368.1 → XP_027287169.1  V-type proton ATPase subunit C 1

    UniProtKB/TrEMBL
    A0A8C2MPF3
Nucleotide Protein Strain
Heading Accession and Version

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