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Chst1 carbohydrate sulfotransferase 1 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100774066, updated on 8-Mar-2024

Summary

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Gene symbol
Chst1
Gene description
carbohydrate sulfotransferase 1
See related
Ensembl:ENSCGRG00015012882
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 6
Exon count:
1
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613646.1 (1055851..1057086, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 6 NC_048599.1 (84124575..84125810, complement)

NW_003613646.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC100773771 Neighboring gene uncharacterized LOC118238330 Neighboring gene solute carrier family 35 member C1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N-acetylglucosamine 6-O-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables keratan sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acetylglucosamine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in keratan sulfate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 1
Names
carbohydrate (keratan sulfate Gal-6) sulfotransferase 1
carbohydrate sulfotransferase 1-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613646.1 Reference CriGri_1.0 Primary Assembly

    Range
    1055851..1057086 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035439966.1 → XP_035295857.1  carbohydrate sulfotransferase 1

    UniProtKB/TrEMBL
    G3GYH5
    Conserved Domains (1) summary
    pfam00685
    Location:200 → 384
    Sulfotransfer_1; Sulfotransferase domain

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048599.1 Alternate CriGri-PICRH-1.0

    Range
    84124575..84125810 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035446242.1 → XP_035302133.1  carbohydrate sulfotransferase 1

    UniProtKB/TrEMBL
    G3GYH5
    Related
    ENSCGRP00015016726.1, ENSCGRT00015020515.2
    Conserved Domains (1) summary
    pfam00685
    Location:200 → 384
    Sulfotransfer_1; Sulfotransferase domain
Nucleotide Protein Strain
Heading Accession and Version

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