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LOC100774126 platelet-activating factor acetylhydrolase IB subunit beta [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100774126, updated on 19-Dec-2023

Summary

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Gene symbol
LOC100774126
Gene description
platelet-activating factor acetylhydrolase IB subunit beta
See related
Ensembl:ENSCGRG00015032623
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Also known as
Pafah1b2
Annotation information
Annotation category: partial on reference assembly
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Genomic context

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Location:
chromosome: 4
Exon count:
5
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003615029.1 (992..10029, complement)
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003615296.1 (1203..8237)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 4 NC_048597.1 (157688522..157706701, complement)

NW_003615296.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene SID1 transmembrane family member 2 Neighboring gene transgelin

NW_003615029.1Genomic Context describing neighboring genes Neighboring gene SIK family kinase 3 Neighboring gene POU domain, class 5, transcription factor 1-like Neighboring gene apolipoprotein A1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
platelet-activating factor acetylhydrolase IB subunit beta
Names
platelet activating factor acetylhydrolase 1b catalytic subunit 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003615029.1 Reference CriGri_1.0 Primary Assembly

    Range
    992..10029 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027442615.2 → XP_027298416.1  platelet-activating factor acetylhydrolase IB subunit beta isoform X2

  2. XM_027442613.2 → XP_027298414.1  platelet-activating factor acetylhydrolase IB subunit beta isoform X2

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003615296.1 Reference CriGri_1.0 Primary Assembly

    Range
    1203..8237
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003511976.4 → XP_003512024.3  platelet-activating factor acetylhydrolase IB subunit beta isoform X1

    UniProtKB/TrEMBL
    A0A8C2LI76, A0A8C2MHK1
    Conserved Domains (1) summary
    cd01820
    Location:8 → 217
    PAF_acetylesterase_like; PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases. Platelet-activating factor (PAF) and PAF-AH are key players in inflammation and in atherosclerosis. PAF-AH is a calcium independent phospholipase A2 which exhibits strong substrate ...

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048597.1 Alternate CriGri-PICRH-1.0

    Range
    157688522..157706701 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027412049.2 → XP_027267850.1  platelet-activating factor acetylhydrolase IB subunit beta isoform X4

    UniProtKB/TrEMBL
    A0A9J7FSS5
    Related
    ENSCGRP00015057157.1, ENSCGRT00015062860.1
    Conserved Domains (1) summary
    cd01820
    Location:1 → 169
    PAF_acetylesterase_like; PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases. Platelet-activating factor (PAF) and PAF-AH are key players in inflammation and in atherosclerosis. PAF-AH is a calcium independent phospholipase A2 which exhibits strong substrate ...

  2. XM_027412050.2 → XP_027267851.1  platelet-activating factor acetylhydrolase IB subunit beta isoform X3

    UniProtKB/TrEMBL
    A0A8C2LI76, A0A8C2MHK1
    Related
    ENSCGRP00015061126.1, ENSCGRT00015067973.1
    Conserved Domains (1) summary
    cd01820
    Location:8 → 217
    PAF_acetylesterase_like; PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases. Platelet-activating factor (PAF) and PAF-AH are key players in inflammation and in atherosclerosis. PAF-AH is a calcium independent phospholipase A2 which exhibits strong substrate ...

  3. XM_035443647.1 → XP_035299538.1  platelet-activating factor acetylhydrolase IB subunit beta isoform X3

    UniProtKB/TrEMBL
    A0A8C2LI76, A0A8C2MHK1
    Conserved Domains (1) summary
    cd01820
    Location:8 → 217
    PAF_acetylesterase_like; PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases. Platelet-activating factor (PAF) and PAF-AH are key players in inflammation and in atherosclerosis. PAF-AH is a calcium independent phospholipase A2 which exhibits strong substrate ...

  4. XM_027412048.2 → XP_027267849.1  platelet-activating factor acetylhydrolase IB subunit beta isoform X3

    UniProtKB/TrEMBL
    A0A8C2LI76, A0A8C2MHK1
    Related
    ENSCGRP00015040719.1, ENSCGRT00015084030.1
    Conserved Domains (1) summary
    cd01820
    Location:8 → 217
    PAF_acetylesterase_like; PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases. Platelet-activating factor (PAF) and PAF-AH are key players in inflammation and in atherosclerosis. PAF-AH is a calcium independent phospholipase A2 which exhibits strong substrate ...

  5. XM_027412047.2 → XP_027267848.1  platelet-activating factor acetylhydrolase IB subunit beta isoform X3

    UniProtKB/TrEMBL
    A0A8C2LI76, A0A8C2MHK1
    Conserved Domains (1) summary
    cd01820
    Location:8 → 217
    PAF_acetylesterase_like; PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases. Platelet-activating factor (PAF) and PAF-AH are key players in inflammation and in atherosclerosis. PAF-AH is a calcium independent phospholipase A2 which exhibits strong substrate ...
Nucleotide Protein Strain
Heading Accession and Version

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