U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Kmt5a lysine methyltransferase 5A [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100774411, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
Kmt5a
Gene description
lysine methyltransferase 5A
See related
Ensembl:ENSCGRG00015023072
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Also known as
Setd8
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 4
Exon count:
6
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614852.1 (50804..65089, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 4 NC_048597.1 (104160373..104182293)

NW_003614852.1Genomic Context describing neighboring genes Neighboring gene small nuclear ribonucleoprotein U11/U12 subunit 35 Neighboring gene Rab interacting lysosomal protein like 2 Neighboring gene strawberry notch homolog 1 Neighboring gene cyclin dependent kinase 2 associated protein 1

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables histone H4K20 methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
N-lysine methyltransferase KMT5A
Names
Histone-lysine N-methyltransferase SETD8
SET domain containing (lysine methyltransferase) 8

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003614852.1 Reference CriGri_1.0 Primary Assembly

    Range
    50804..65089 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035461078.1 → XP_035316969.1  N-lysine methyltransferase KMT5A isoform X1

    UniProtKB/TrEMBL
    A0A8C2QMN0
    Conserved Domains (1) summary
    cd10528
    Location:212 → 351
    SET_SETD8; SET domain found in SET domain-containing protein 8 (SETD8) and similar proteins

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048597.1 Alternate CriGri-PICRH-1.0

    Range
    104160373..104182293
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027413921.2 → XP_027269722.1  N-lysine methyltransferase KMT5A isoform X5

    UniProtKB/TrEMBL
    G3I4X7
    Related
    ENSCGRP00015030705.2, ENSCGRT00015037536.2

  2. XM_027413919.2 → XP_027269720.1  N-lysine methyltransferase KMT5A isoform X3

    UniProtKB/TrEMBL
    A0A8C2MXA4
    Related
    ENSCGRP00015030693.1, ENSCGRT00015037524.2

  3. XM_027413918.2 → XP_027269719.1  N-lysine methyltransferase KMT5A isoform X2

    UniProtKB/TrEMBL
    A0A8C2QMN0
    Related
    ENSCGRP00015059246.1, ENSCGRT00015067125.1
    Conserved Domains (1) summary
    cd10528
    Location:212 → 351
    SET_SETD8; SET domain found in SET domain-containing protein 8 (SETD8) and similar proteins

  4. XM_027413922.2 → XP_027269723.1  N-lysine methyltransferase KMT5A isoform X4

    UniProtKB/TrEMBL
    A0A9J7FYC8
    Related
    ENSCGRP00015045383.1, ENSCGRT00015066798.1

  5. XM_027413920.2 → XP_027269721.1  N-lysine methyltransferase KMT5A isoform X5

    UniProtKB/TrEMBL
    G3I4X7
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.