U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Synj2 synaptojanin 2 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100774472, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
Synj2
Gene description
synaptojanin 2
Locus tag
I79_009488
See related
Ensembl:ENSCGRG00015011000
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 2
Exon count:
26
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613918.1 (1420878..1486240)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 2 NC_048595.1 (287060425..287159610)

NW_003613918.1Genomic Context describing neighboring genes Neighboring gene splicing factor YJU2-like Neighboring gene transfer RNA lysine (anticodon UUU) Neighboring gene profilin-1-like Neighboring gene serine active site containing 1 Neighboring gene general transcription factor IIH subunit 5

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in brain development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phosphatidylinositol dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synaptic vesicle endocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in perinuclear region of cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in presynapse IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
LOW QUALITY PROTEIN: synaptojanin-2
Names
Synaptojanin-2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613918.1 Reference CriGri_1.0 Primary Assembly

    Range
    1420878..1486240
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027436828.2 → XP_027292629.1  LOW QUALITY PROTEIN: synaptojanin-2 isoform X1

    UniProtKB/TrEMBL
    A0A8C2LLI4

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048595.1 Alternate CriGri-PICRH-1.0

    Range
    287060425..287159610
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027401066.2 → XP_027256867.1  LOW QUALITY PROTEIN: synaptojanin-2 isoform X2

    UniProtKB/TrEMBL
    A0A061IM85, A0A9J7FGD2
    Related
    ENSCGRP00015014513.2, ENSCGRT00015017785.2
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.