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Atp10a ATPase phospholipid transporting 10A (putative) [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100774607, updated on 8-Mar-2024

Summary

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Gene symbol
Atp10a
Gene description
ATPase phospholipid transporting 10A (putative)
Locus tag
I79_016291
See related
Ensembl:ENSCGRG00015026499
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
21
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614530.1 (465045..628692)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 3 NC_048596.1 (139025916..139192316, complement)

NW_003614530.1Genomic Context describing neighboring genes Neighboring gene glyceraldehyde-3-phosphate dehydrogenase-like Neighboring gene transfer RNA glutamic acid (anticodon UUC)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATPase-coupled intramembrane lipid transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables magnesium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phospholipid translocation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable phospholipid-transporting ATPase VA
Names
ATPase, class V, type 10A
putative phospholipid-transporting ATPase VA

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003614530.1 Reference CriGri_1.0 Primary Assembly

    Range
    465045..628692
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035459800.1 → XP_035315691.1  probable phospholipid-transporting ATPase VA isoform X1

    UniProtKB/TrEMBL
    A0A8C2M7E6
    Conserved Domains (1) summary
    cd02073
    Location:66 → 1203
    P-type_ATPase_APLT_Dnf-like; Aminophospholipid translocases (APLTs), similar to Saccharomyces cerevisiae Dnf1-3p, Drs2p, and human ATP8A2, -10D, -11B, -11C

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048596.1 Alternate CriGri-PICRH-1.0

    Range
    139025916..139192316 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027404730.1 → XP_027260531.1  probable phospholipid-transporting ATPase VA isoform X2

    UniProtKB/TrEMBL
    A0A8C2M7E6, A0A9J7JHU6
    Related
    ENSCGRP00015035306.2, ENSCGRT00015043017.2
Nucleotide Protein Strain
Heading Accession and Version

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