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Phyh phytanoyl-CoA 2-hydroxylase [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100774732, updated on 8-Mar-2024

Summary

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Gene symbol
Phyh
Gene description
phytanoyl-CoA 2-hydroxylase
See related
Ensembl:ENSCGRG00015020826
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
9
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613621.1 (2331873..2351626, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 3 NC_048596.1 (222136080..222155878)

NW_003613621.1Genomic Context describing neighboring genes Neighboring gene minichromosome maintenance 10 replication initiation factor Neighboring gene upper zone of growth plate and cartilage matrix associated Neighboring gene selenophosphate synthetase 1 Neighboring gene BEN domain containing 7

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phytanoyl-CoA dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid alpha-oxidation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phytanoyl-CoA dioxygenase, peroxisomal
Names
Phytanoyl-CoA dioxygenase, peroxisomal

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613621.1 Reference CriGri_1.0 Primary Assembly

    Range
    2331873..2351626 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003496411.5 → XP_003496459.1  phytanoyl-CoA dioxygenase, peroxisomal

    See identical proteins and their annotated locations for XP_003496459.1

    UniProtKB/TrEMBL
    G3GVQ7
    Conserved Domains (1) summary
    pfam05721
    Location:61 → 277
    PhyH; Phytanoyl-CoA dioxygenase (PhyH)

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048596.1 Alternate CriGri-PICRH-1.0

    Range
    222136080..222155878
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027405191.2 → XP_027260992.1  phytanoyl-CoA dioxygenase, peroxisomal

    UniProtKB/TrEMBL
    G3GVQ7
    Related
    ENSCGRP00015043080.1, ENSCGRT00015064622.1
Nucleotide Protein Strain
Heading Accession and Version

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