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Sphk2 sphingosine kinase 2 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100774790, updated on 8-Mar-2024

Summary

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Gene symbol
Sphk2
Gene description
sphingosine kinase 2
See related
Ensembl:ENSCGRG00015037852
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 6
Exon count:
5
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614570.1 (43778..45886)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 6 NC_048599.1 (154611497..154619501, complement)

NW_003614570.1Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 83 member E Neighboring gene sperm acrosome associated 4 Neighboring gene ribosomal protein L18 Neighboring gene D-box binding PAR bZIP transcription factor Neighboring gene carbonic anhydrase 11

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables D-erythro-sphingosine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sphinganine-1-phosphate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sphingosine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in intracellular membrane-bounded organelle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sphingosine kinase 2
Names
sphingosine kinase 2-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003614570.1 Reference CriGri_1.0 Primary Assembly

    Range
    43778..45886
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035459975.1 → XP_035315866.1  sphingosine kinase 2 isoform X1

    Conserved Domains (1) summary
    PLN02958
    Location:1 → 420
    PLN02958; diacylglycerol kinase/D-erythro-sphingosine kinase

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048599.1 Alternate CriGri-PICRH-1.0

    Range
    154611497..154619501 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027420590.2 → XP_027276391.1  sphingosine kinase 2 isoform X2

    UniProtKB/TrEMBL
    A0A8C2N1S8, A0A9J7G520
    Conserved Domains (1) summary
    PLN02958
    Location:142 → 598
    PLN02958; diacylglycerol kinase/D-erythro-sphingosine kinase

  2. XM_027420587.2 → XP_027276388.1  sphingosine kinase 2 isoform X2

    UniProtKB/TrEMBL
    A0A8C2N1S8, A0A9J7G520
    Conserved Domains (1) summary
    PLN02958
    Location:142 → 598
    PLN02958; diacylglycerol kinase/D-erythro-sphingosine kinase

  3. XM_027420588.2 → XP_027276389.1  sphingosine kinase 2 isoform X2

    UniProtKB/TrEMBL
    A0A8C2N1S8, A0A9J7G520
    Conserved Domains (1) summary
    PLN02958
    Location:142 → 598
    PLN02958; diacylglycerol kinase/D-erythro-sphingosine kinase

  4. XM_027420586.2 → XP_027276387.1  sphingosine kinase 2 isoform X2

    UniProtKB/TrEMBL
    A0A8C2N1S8, A0A9J7G520
    Related
    ENSCGRP00015050176.1, ENSCGRT00015056316.1
    Conserved Domains (1) summary
    PLN02958
    Location:142 → 598
    PLN02958; diacylglycerol kinase/D-erythro-sphingosine kinase

  5. XM_027420591.2 → XP_027276392.1  sphingosine kinase 2 isoform X3

    UniProtKB/TrEMBL
    A0A8C2N1S8, A0A9J7JR71

  6. XM_035446291.1 → XP_035302182.1  sphingosine kinase 2 isoform X2

    UniProtKB/TrEMBL
    A0A8C2N1S8, A0A9J7G520
    Conserved Domains (1) summary
    PLN02958
    Location:142 → 598
    PLN02958; diacylglycerol kinase/D-erythro-sphingosine kinase

  7. XM_027420589.2 → XP_027276390.1  sphingosine kinase 2 isoform X2

    UniProtKB/TrEMBL
    A0A8C2N1S8, A0A9J7G520
    Conserved Domains (1) summary
    PLN02958
    Location:142 → 598
    PLN02958; diacylglycerol kinase/D-erythro-sphingosine kinase
Nucleotide Protein Strain
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