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Hacd4 3-hydroxyacyl-CoA dehydratase 4 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100774830, updated on 8-Mar-2024

Summary

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Gene symbol
Hacd4
Gene description
3-hydroxyacyl-CoA dehydratase 4
Locus tag
I79_002592
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Also known as
Ptplad2
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2
Exon count:
5
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613640.1 (3231506..3255091, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 2 NC_048595.1 (59583785..59607258)

NW_003613640.1Genomic Context describing neighboring genes Neighboring gene LYR motif-containing protein 4-like Neighboring gene focadhesin Neighboring gene interferon alpha-12 Neighboring gene interferon beta 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3-hydroxyacyl-CoA dehydratase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid elongation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sphingolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in very long-chain fatty acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 4
Names
Protein tyrosine phosphatase-like protein PTPLAD2
protein tyrosine phosphatase-like A domain containing 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613640.1 Reference CriGri_1.0 Primary Assembly

    Range
    3231506..3255091 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035438651.1 → XP_035294542.1  very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 4

    UniProtKB/TrEMBL
    A0A8C2QHY1, A0A9J7GNM0
    Conserved Domains (1) summary
    pfam04387
    Location:16 → 173
    PTPLA; Protein tyrosine phosphatase-like protein, PTPLA

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048595.1 Alternate CriGri-PICRH-1.0

    Range
    59583785..59607258
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035439810.1 → XP_035295701.1  very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 4

    UniProtKB/TrEMBL
    A0A8C2QHY1, A0A9J7GNM0
    Conserved Domains (1) summary
    pfam04387
    Location:16 → 173
    PTPLA; Protein tyrosine phosphatase-like protein, PTPLA
Nucleotide Protein Strain
Heading Accession and Version

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