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Ocrl OCRL inositol polyphosphate-5-phosphatase [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100774848, updated on 8-Mar-2024

Summary

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Gene symbol
Ocrl
Gene description
OCRL inositol polyphosphate-5-phosphatase
Locus tag
I79_004970
See related
Ensembl:ENSCGRG00015013713
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: X
Exon count:
22
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613712.1 (738582..788379, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) X NC_048604.1 (21482770..21536748, complement)

NW_003613712.1Genomic Context describing neighboring genes Neighboring gene X-prolyl aminopeptidase 2 Neighboring gene apelin Neighboring gene uncharacterized LOC118239447 Neighboring gene SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 Neighboring gene 60S acidic ribosomal protein P0-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables inositol phosphate phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidylinositol dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
inositol polyphosphate 5-phosphatase OCRL
Names
Inositol polyphosphate 5-phosphatase OCRL-1
oculocerebrorenal syndrome of Lowe

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613712.1 Reference CriGri_1.0 Primary Assembly

    Range
    738582..788379 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035450469.1 → XP_035306360.1  inositol polyphosphate 5-phosphatase OCRL isoform X2

    UniProtKB/TrEMBL
    A0A8C2M3E6
    Conserved Domains (3) summary
    cd09093
    Location:239 → 514
    INPP5c_INPP5B; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of Type II inositol polyphosphate 5-phosphatase I, Oculocerebrorenal syndrome of Lowe 1, and related proteins
    cd04380
    Location:649 → 869
    RhoGAP_OCRL1; RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain present in OCRL1-like proteins. OCRL1 (oculocerebrorenal syndrome of Lowe 1)-like proteins contain two conserved domains: a central inositol polyphosphate 5-phosphatase domain and ...
    cd13382
    Location:11 → 115
    PH_OCRL1; oculocerebrorenal syndrome of Lowe 1 Pleckstrin homology-like domain

  2. XM_035450465.1 → XP_035306356.1  inositol polyphosphate 5-phosphatase OCRL isoform X1

    UniProtKB/TrEMBL
    A0A8C2M3E6
    Conserved Domains (3) summary
    cd09093
    Location:239 → 514
    INPP5c_INPP5B; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of Type II inositol polyphosphate 5-phosphatase I, Oculocerebrorenal syndrome of Lowe 1, and related proteins
    cd04380
    Location:649 → 877
    RhoGAP_OCRL1; RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain present in OCRL1-like proteins. OCRL1 (oculocerebrorenal syndrome of Lowe 1)-like proteins contain two conserved domains: a central inositol polyphosphate 5-phosphatase domain and ...
    cd13382
    Location:11 → 115
    PH_OCRL1; oculocerebrorenal syndrome of Lowe 1 Pleckstrin homology-like domain

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048604.1 Alternate CriGri-PICRH-1.0

    Range
    21482770..21536748 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027433447.2 → XP_027289248.1  inositol polyphosphate 5-phosphatase OCRL isoform X4

    UniProtKB/TrEMBL
    A0A8C2M3E6, A0A9J7GLL9
    Related
    ENSCGRP00015017931.2, ENSCGRT00015022035.2

  2. XM_027433446.2 → XP_027289247.1  inositol polyphosphate 5-phosphatase OCRL isoform X3

    UniProtKB/TrEMBL
    A0A8C2M2J4, A0A8C2M3E6
    Related
    ENSCGRP00015017840.2, ENSCGRT00015021926.2
Nucleotide Protein Strain
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