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Pde4b phosphodiesterase 4B [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100774886, updated on 8-Mar-2024

Summary

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Gene symbol
Pde4b
Gene description
phosphodiesterase 4B
See related
Ensembl:ENSCGRG00015001941
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2
Exon count:
15
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614061.1 (663016..883986, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 2 NC_048595.1 (47113675..47450845, complement)

NW_003614061.1Genomic Context describing neighboring genes Neighboring gene dynein light chain Tctex-type family member 5 Neighboring gene SH3GL interacting endocytic adaptor 1 Neighboring gene uncharacterized LOC103162510 Neighboring gene uncharacterized LOC103164032

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3',5'-cyclic-AMP phosphodiesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transmembrane transporter binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in perinuclear region of cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cAMP-specific 3',5'-cyclic phosphodiesterase 4B
Names
cAMP-specific 3',5'-cyclic phosphodiesterase 4B-like
phosphodiesterase 4B, cAMP-specific

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003614061.1 Reference CriGri_1.0 Primary Assembly

    Range
    663016..883986 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007644971.4 → XP_007643161.1  cAMP-specific 3',5'-cyclic phosphodiesterase 4B isoform X1

    UniProtKB/TrEMBL
    A0A8C2LBP0, A0A9J7JA78
    Conserved Domains (1) summary
    pfam00233
    Location:318 → 559
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048595.1 Alternate CriGri-PICRH-1.0

    Range
    47113675..47450845 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027402289.2 → XP_027258090.1  cAMP-specific 3',5'-cyclic phosphodiesterase 4B isoform X1

    UniProtKB/TrEMBL
    A0A8C2LBP0, A0A9J7JA78
    Related
    ENSCGRP00015002853.1, ENSCGRT00015003528.2

  2. XM_035439769.1 → XP_035295660.1  cAMP-specific 3',5'-cyclic phosphodiesterase 4B isoform X3

    UniProtKB/TrEMBL
    A0A8C2LBP0, A0A9J7GRP6
    Conserved Domains (2) summary
    pfam00233
    Location:257 → 498
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase
    pfam18100
    Location:18 → 133
    PDE4_UCR; Phosphodiesterase 4 upstream conserved regions (UCR)

  3. XM_035439768.1 → XP_035295659.1  cAMP-specific 3',5'-cyclic phosphodiesterase 4B isoform X3

    UniProtKB/TrEMBL
    A0A8C2LBP0, A0A9J7GRP6
    Conserved Domains (2) summary
    pfam00233
    Location:257 → 498
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase
    pfam18100
    Location:18 → 133
    PDE4_UCR; Phosphodiesterase 4 upstream conserved regions (UCR)

  4. XM_035439770.1 → XP_035295661.1  cAMP-specific 3',5'-cyclic phosphodiesterase 4B isoform X3

    UniProtKB/TrEMBL
    A0A8C2LBP0, A0A9J7GRP6
    Conserved Domains (2) summary
    pfam00233
    Location:257 → 498
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase
    pfam18100
    Location:18 → 133
    PDE4_UCR; Phosphodiesterase 4 upstream conserved regions (UCR)

  5. XM_035439767.1 → XP_035295658.1  cAMP-specific 3',5'-cyclic phosphodiesterase 4B isoform X2

    UniProtKB/TrEMBL
    A0A8C2LBP0, A0A9J7GRW9
    Conserved Domains (2) summary
    pfam00233
    Location:314 → 555
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase
    pfam18100
    Location:75 → 190
    PDE4_UCR; Phosphodiesterase 4 upstream conserved regions (UCR)

  6. XM_035439772.1 → XP_035295663.1  cAMP-specific 3',5'-cyclic phosphodiesterase 4B isoform X4

    UniProtKB/TrEMBL
    A0A8C2LB22, G3HLA4
    Related
    ENSCGRP00015003046.2, ENSCGRT00015003768.2
    Conserved Domains (2) summary
    pfam00233
    Location:186 → 427
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase
    pfam18100
    Location:1 → 62
    PDE4_UCR; Phosphodiesterase 4 upstream conserved regions (UCR)

  7. XM_035439771.1 → XP_035295662.1  cAMP-specific 3',5'-cyclic phosphodiesterase 4B isoform X4

    UniProtKB/TrEMBL
    A0A8C2LB22, G3HLA4
    Conserved Domains (2) summary
    pfam00233
    Location:186 → 427
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase
    pfam18100
    Location:1 → 62
    PDE4_UCR; Phosphodiesterase 4 upstream conserved regions (UCR)
Nucleotide Protein Strain
Heading Accession and Version

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