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NLGN4Y-AS1 NLGN4Y antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 100874056, updated on 10-Oct-2023

Summary

Official Symbol
NLGN4Y-AS1provided by HGNC
Official Full Name
NLGN4Y antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:38793
See related
Ensembl:ENSG00000228787 AllianceGenome:HGNC:38793
Gene type
ncRNA
RefSeq status
PREDICTED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
NLGN4YAS; NLGN4Y-AS
Expression
Low expression observed in reference dataset See more
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Genomic context

See NLGN4Y-AS1 in Genome Data Viewer
Location:
Yq11.221
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) Y NC_000024.10 (14793642..14804033, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) Y NC_060948.1 (15700272..15710622, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) Y NC_000024.9 (16905522..16915913, complement)

Chromosome Y - NC_000024.10Genomic Context describing neighboring genes Neighboring gene patatin-like phospholipase domain containing 4 pseudogene 1 Neighboring gene MED14-independent group 3 enhancer GRCh37_chrY:16452370-16453569 Neighboring gene neuroligin 4 Y-linked Neighboring gene AGK pseudogene 1 Neighboring gene mediator complex subunit 13 pseudogene 1 Neighboring gene CYCS pseudogene 46

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Other Names

  • NLGN4Y antisense RNA (non-protein coding)
  • NLGN4Y antisense RNA 1 (non-protein coding)

Clone Names

  • AC010879.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_046504.1 RNA Sequence

    Status: PREDICTED

    Source sequence(s)
    AC010879
    Related
    ENST00000434164.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000024.10 Reference GRCh38.p14 Primary Assembly

    Range
    14793642..14804033 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060948.1 Alternate T2T-CHM13v2.0

    Range
    15700272..15710622 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)