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LOC1275295 general transcription factor IIH subunit 2 [ Anopheles gambiae (African malaria mosquito) ]

Gene ID: 1275295, updated on 4-Jan-2024

Summary

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Gene symbol
LOC1275295
Gene description
general transcription factor IIH subunit 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Anopheles gambiae
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles
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Genomic context

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See LOC1275295 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_12 current idAnoGambNW_F1_1 (GCF_943734735.2) 3 NC_064602.1 (64189085..64190922)

Chromosome 3 - NC_064602.1Genomic Context describing neighboring genes Neighboring gene cationic amino acid transporter 3 Neighboring gene B-cell receptor-associated protein 31 Neighboring gene ER membrane protein complex subunit 4 Neighboring gene cationic amino acid transporter 2 Neighboring gene cationic amino acid transporter 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064602.1 Chromosome 3 Reference idAnoGambNW_F1_1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Anopheles gambiae genome: an update. Mongin E, et al. Trends Parasitol, 2004 Feb. PMID 14747013
  2. The genome sequence of the malaria mosquito Anopheles gambiae. Holt RA, et al. Science, 2002 Oct 4. PMID 12364791

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nucleotide-excision repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of transcription factor TFIIH core complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription factor TFIIH holo complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
general transcription factor IIH subunit 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_943734735.2-RS_2023_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference idAnoGambNW_F1_1 Primary Assembly

Genomic

  1. NC_064602.1 Reference idAnoGambNW_F1_1 Primary Assembly

    Range
    64189085..64190922
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_314533.5 → XP_314533.4  general transcription factor IIH subunit 2

    See identical proteins and their annotated locations for XP_314533.4

    UniProtKB/TrEMBL
    Q7PPS5
    Conserved Domains (1) summary
    COG5151
    Location:8 → 396
    SSL1; RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH, subunit SSL1 [Transcription / DNA replication, recombination, and repair]
Nucleotide Protein Strain
Heading Accession and Version

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