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PCYB_081730 histone deacetylase [ Plasmodium cynomolgi strain B ]

Gene ID: 14692362, updated on 28-Dec-2023

Summary

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Gene symbol
PCYB_081730
Gene description
histone deacetylase
Locus tag
PCYB_081730
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Plasmodium cynomolgi strain B (strain: B)
Lineage
Eukaryota; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodium; Plasmodium (Plasmodium)
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Genomic context

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Location:
chromosome: 8
Exon count:
2
Sequence:
NC_020401.1 (366143..372913)

NC_020401.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene eukaryotic translation initiation factor 3 subunit 7 Neighboring gene hypothetical protein Neighboring gene endonuclease

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_020401.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Plasmodium cynomolgi genome sequences provide insight into Plasmodium vivax and the monkey malaria clade. Tachibana S, et al. Nat Genet, 2012 Sep. PMID 22863735, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in inositol phosphate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
histone deacetylase
XP_004221959.1
  • putative

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_020401.1 Reference assembly

    Range
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004221911.1 → XP_004221959.1  histone deacetylase [Plasmodium cynomolgi strain B]

    See identical proteins and their annotated locations for XP_004221959.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    K6VA30
    Conserved Domains (4) summary
    pfam05887
    Location:635 → 733
    Trypan_PARP; Procyclic acidic repetitive protein (PARP)
    cd09992
    Location:809 → 1146
    HDAC_classII; Histone deacetylases and histone-like deacetylases, classII
    cl12283
    Location:1855 → 2001
    IPK; Inositol polyphosphate kinase
    cl17011
    Location:438 → 543
    Arginase_HDAC; Arginase-like and histone-like hydrolases
Nucleotide Protein
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