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PCYB_092150 vivapain [ Plasmodium cynomolgi strain B ]

Gene ID: 14692783, updated on 17-May-2024

Summary

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Gene symbol
PCYB_092150
Gene description
vivapain
Primary source
PlasmoDB:PCYB_092150
Locus tag
PCYB_092150
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Plasmodium cynomolgi strain B (strain: B)
Lineage
Eukaryota; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodium; Plasmodium (Plasmodium)
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Genomic context

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Location:
chromosome: 9
Exon count:
3
Sequence:
NC_020402.1 (507647..509119, complement)

NC_020402.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene falcipain-like protein Neighboring gene falcipain-like protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_020402.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Plasmodium cynomolgi genome sequences provide insight into Plasmodium vivax and the monkey malaria clade. Tachibana S, et al. Nat Genet, 2012 Sep. PMID 22863735, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteolysis involved in protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lysosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
vivapain
XP_004222376.1
  • putative

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_020402.1 Reference assembly

    Range
    507647..509119 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004222328.1 → XP_004222376.1  vivapain [Plasmodium cynomolgi strain B]

    See identical proteins and their annotated locations for XP_004222376.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    K6UT32
    Conserved Domains (2) summary
    PTZ00021
    Location:1 → 344
    PTZ00021; falcipain-2; Provisional
    cl23744
    Location:156 → 342
    Peptidase_C1; C1 Peptidase family (MEROPS database nomenclature), also referred to as the papain family; composed of two subfamilies of cysteine peptidases (CPs), C1A (papain) and C1B (bleomycin hydrolase). Papain-like enzymes are mostly endopeptidases with some ...
Nucleotide Protein
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