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PCYB_113430 superoxide dismutase [ Plasmodium cynomolgi strain B ]

Gene ID: 14693689, updated on 28-Dec-2023

Summary

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Gene symbol
PCYB_113430
Gene description
superoxide dismutase
Locus tag
PCYB_113430
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Plasmodium cynomolgi strain B (strain: B)
Lineage
Eukaryota; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodium; Plasmodium (Plasmodium)
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Genomic context

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Location:
chromosome: 11
Exon count:
10
Sequence:
NC_020404.1 (1114839..1117379)

NC_020404.1Genomic Context describing neighboring genes Neighboring gene ATP-dependent DEAD box helicase Neighboring gene hypothetical protein Neighboring gene RNA-binding protein mei2 homologue Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_020404.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Plasmodium cynomolgi genome sequences provide insight into Plasmodium vivax and the monkey malaria clade. Tachibana S, et al. Nat Genet, 2012 Sep. PMID 22863735, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables superoxide dismutase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in superoxide metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
superoxide dismutase
XP_004223270.1
  • putative

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_020404.1 Reference assembly

    Range
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004223222.1 → XP_004223270.1  superoxide dismutase [Plasmodium cynomolgi strain B]

    See identical proteins and their annotated locations for XP_004223270.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    K6UL16
    Conserved Domains (3) summary
    PTZ00078
    Location:83 → 253
    PTZ00078; Superoxide dismutase [Fe]; Provisional
    pfam00081
    Location:79 → 160
    Sod_Fe_N; Iron/manganese superoxide dismutases, alpha-hairpin domain
    pfam02777
    Location:167 → 246
    Sod_Fe_C; Iron/manganese superoxide dismutases, C-terminal domain
Nucleotide Protein
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