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PCYB_124770 1-deoxy-D-xylulose 5-phosphate reductoisomerase [ Plasmodium cynomolgi strain B ]

Gene ID: 14694284, updated on 28-Dec-2023

Summary

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Gene symbol
PCYB_124770
Gene description
1-deoxy-D-xylulose 5-phosphate reductoisomerase
Locus tag
PCYB_124770
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Plasmodium cynomolgi strain B (strain: B)
Lineage
Eukaryota; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodium; Plasmodium (Plasmodium)
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Genomic context

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Location:
chromosome: 12
Exon count:
2
Sequence:
NC_020405.1 (1628321..1629949, complement)

NC_020405.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene ribosomal protein Neighboring gene hypothetical protein Neighboring gene DNA-3-methyladenine glycosylase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_020405.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Plasmodium cynomolgi genome sequences provide insight into Plasmodium vivax and the monkey malaria clade. Tachibana S, et al. Nat Genet, 2012 Sep. PMID 22863735, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables NADPH binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables manganese ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in isoprenoid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
1-deoxy-D-xylulose 5-phosphate reductoisomerase
XP_004223858.1
  • putative

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_020405.1 Reference assembly

    Range
    1628321..1629949 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004223810.1 → XP_004223858.1  1-deoxy-D-xylulose 5-phosphate reductoisomerase [Plasmodium cynomolgi strain B]

    See identical proteins and their annotated locations for XP_004223858.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    K6UE85
    Conserved Domains (4) summary
    PRK05447
    Location:131 → 513
    PRK05447; 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional
    pfam02670
    Location:132 → 264
    DXP_reductoisom; 1-deoxy-D-xylulose 5-phosphate reductoisomerase
    pfam08436
    Location:279 → 375
    DXP_redisom_C; 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal
    pfam13288
    Location:410 → 493
    DXPR_C; DXP reductoisomerase C-terminal domain
Nucleotide Protein
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