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set4 superantigen-like protein [ Staphylococcus aureus subsp. aureus MRSA252 ]

Gene ID: 2859141, discontinued on 3-Feb-2015
  • All Gene records for this genome have been discontinued due to a change in scope for prokaryotic genomes in Gene. At the time this Gene record was discontinued, the RefSeq genome was re-annotated with the following features at this location:

Summary

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Gene symbol
set4
Gene description
superantigen-like protein
Locus tag
SAR0431
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Staphylococcus aureus subsp. aureus MRSA252 (strain: MRSA252, sub-species: aureus MRSA252)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus
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Genomic regions, transcripts, and products

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Genomic Sequence:
NC_002952.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Miscellaneous features

  • Loc: 460785-461099 Pfam match to entry PF02876 Stap_Strp_tox_C, Staphylococcal/Streptococcal toxin, beta-grasp domain, score 0.70, E-value 0.0036
  • Loc: 460881-460952 PS00278 Staphyloccocal enterotoxin/Streptococcal pyrogenic exotoxin signature 2.

General protein information

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Names
superantigen-like protein
YP_039882.1
  • these proteins share structural homology to known superantigen proteins but do not exhibit any of the properties expected such as histocompatibility complex class II binding or broad T-cell activation

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002952.2 Reference assembly

    Range
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_039882.1 superantigen-like protein [Staphylococcus aureus subsp. aureus MRSA252]

    Status: PROVISIONAL

Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q6GJP0.1

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.