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CPP ceruloplasmin pseudogene [ Homo sapiens (human) ]

Gene ID: 340451, updated on 10-Oct-2023

Summary

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Official Symbol
CPPprovided by HGNC
Official Full Name
ceruloplasmin pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:2322
See related
AllianceGenome:HGNC:2322
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See CPP in Genome Data Viewer
Location:
8q21.3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (91157278..91159922)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 8 NC_060932.1 (92282215..92284859)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 8 NC_000008.10 (92169506..92172150)

Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene OTUD6B antisense RNA 1 (head to head) Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27614 Neighboring gene OTU deubiquitinase 6B Neighboring gene MPRA-validated peak7106 silencer Neighboring gene leucine rich repeat containing 69 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:92209377-92209886 Neighboring gene microRNA 4661 Neighboring gene solute carrier family 26 member 7 Neighboring gene uncharacterized LOC105375637

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. On the importance of electrostatic interactions between cell penetrating peptides and membranes: a pathway toward tumor cell selectivity? Jobin ML, et al. Biochimie, 2014 Dec. PMID 25107405
  2. Isolation and characterization of a processed gene for human ceruloplasmin. Koschinsky ML, et al. Biochemistry, 1987 Dec 1. PMID 3427102
  3. The revelation of expressing region in the processed ceruloplasmin gene in human genome by biocomputational and biochemical methods. Platonova NA, et al. Biophys Chem, 2005 Apr 1. PMID 15752613

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. cell penetrating peptides v
    Title: On the importance of electrostatic interactions between cell penetrating peptides and membranes: a pathway toward tumor cell selectivity?
  2. Cp polypeptides with molecular weight of nearly 30 kDa were found in mitochondria of HuTu 80 cells
    Title: The revelation of expressing region in the processed ceruloplasmin gene in human genome by biocomputational and biochemical methods.
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Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Markers

Other Names

  • ceruloplasmin (ferroxidase) pseudogene

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_001106.3 

    Range
    101..2745
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    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

    Range
    91157278..91159922
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060932.1 Alternate T2T-CHM13v2.0

    Range
    92282215..92284859
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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