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SORBS1 sorbin and SH3 domain containing 1 [ Pan troglodytes (chimpanzee) ]

Gene ID: 450628, updated on 3-Apr-2024

Summary

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Official Symbol
SORBS1provided by VGNC
Official Full Name
sorbin and SH3 domain containing 1provided by VGNC
Primary source
VGNC:VGNC:12506
Locus tag
CK820_G0004243
See related
Ensembl:ENSPTRG00000002784
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 10
Exon count:
36
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 8 NC_072406.2 (107418274..107667918, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 10 NC_072408.1 (98031023..98280671, complement)

Chromosome 8 - NC_072406.2Genomic Context describing neighboring genes Neighboring gene acyl-CoA synthetase medium chain family member 6 Neighboring gene PDZ and LIM domain 1 Neighboring gene small ribosomal subunit protein eS1-like Neighboring gene aldehyde dehydrogenase 18 family member A1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-substrate adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-substrate junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sorbin and SH3 domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072406.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    107418274..107667918 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016918956.4 → XP_016774445.1  sorbin and SH3 domain-containing protein 1 isoform X50

    UniProtKB/TrEMBL
    A0A2J8PDZ6, A0A2J8PDZ7
    Conserved Domains (5) summary
    cd11916
    Location:625 → 683
    SH3_Sorbs1_3; Third (or C-terminal) Src Homology 3 domain of Sorbin and SH3 domain containing 1 (Sorbs1), also called ponsin
    cd11919
    Location:446 → 500
    SH3_Sorbs1_1; First Src Homology 3 domain of Sorbin and SH3 domain containing 1 (Sorbs1), also called ponsin
    cd11922
    Location:520 → 577
    SH3_Sorbs1_2; Second Src Homology 3 domain of Sorbin and SH3 domain containing 1 (Sorbs1), also called ponsin
    pfam02208
    Location:206 → 247
    Sorb; Sorbin homologous domain
    cl25836
    Location:19 → 202
    Retinal; Retinal protein

  2. XM_016918934.4 → XP_016774423.2  sorbin and SH3 domain-containing protein 1 isoform X19

  3. XM_016918928.4 → XP_016774417.2  sorbin and SH3 domain-containing protein 1 isoform X15

  4. XM_016918916.4 → XP_016774405.3  sorbin and SH3 domain-containing protein 1 isoform X7

  5. XM_054660364.2 → XP_054516339.1  sorbin and SH3 domain-containing protein 1 isoform X22

  6. XM_063782044.1 → XP_063638114.1  sorbin and SH3 domain-containing protein 1 isoform X20

  7. XM_016918933.4 → XP_016774422.2  sorbin and SH3 domain-containing protein 1 isoform X18

  8. XM_016918912.4 → XP_016774401.3  sorbin and SH3 domain-containing protein 1 isoform X6

  9. XM_016918931.4 → XP_016774420.2  sorbin and SH3 domain-containing protein 1 isoform X17

  10. XM_016918907.4 → XP_016774396.3  sorbin and SH3 domain-containing protein 1 isoform X2

  11. XM_016918930.4 → XP_016774419.2  sorbin and SH3 domain-containing protein 1 isoform X16

  12. XM_016918944.4 → XP_016774433.1  sorbin and SH3 domain-containing protein 1 isoform X28

    UniProtKB/TrEMBL
    A0A2I3RAC2, A0A2I3SFT7, A0A2J8PDY2, A0A6D2XW79
    Related
    ENSPTRP00000075887.1
    Conserved Domains (4) summary
    cd11916
    Location:1207 → 1265
    SH3_Sorbs1_3; Third (or C-terminal) Src Homology 3 domain of Sorbin and SH3 domain containing 1 (Sorbs1), also called ponsin
    cd11919
    Location:750 → 804
    SH3_Sorbs1_1; First Src Homology 3 domain of Sorbin and SH3 domain containing 1 (Sorbs1), also called ponsin
    cd11922
    Location:824 → 881
    SH3_Sorbs1_2; Second Src Homology 3 domain of Sorbin and SH3 domain containing 1 (Sorbs1), also called ponsin
    pfam02208
    Location:370 → 411
    Sorb; Sorbin homologous domain

  13. XM_063782047.1 → XP_063638117.1  sorbin and SH3 domain-containing protein 1 isoform X26

  14. XM_016918942.4 → XP_016774431.1  sorbin and SH3 domain-containing protein 1 isoform X25

    UniProtKB/TrEMBL
    A0A2I3RAC2, A0A2J8PDY8, A0A6D2W0H4, H2Q2B4
    Related
    ENSPTRP00000004863.5
    Conserved Domains (4) summary
    cd11916
    Location:1233 → 1291
    SH3_Sorbs1_3; Third (or C-terminal) Src Homology 3 domain of Sorbin and SH3 domain containing 1 (Sorbs1), also called ponsin
    cd11919
    Location:796 → 850
    SH3_Sorbs1_1; First Src Homology 3 domain of Sorbin and SH3 domain containing 1 (Sorbs1), also called ponsin
    cd11922
    Location:870 → 927
    SH3_Sorbs1_2; Second Src Homology 3 domain of Sorbin and SH3 domain containing 1 (Sorbs1), also called ponsin
    pfam02208
    Location:370 → 408
    Sorb; Sorbin homologous domain

  15. XM_063782046.1 → XP_063638116.1  sorbin and SH3 domain-containing protein 1 isoform X24

  16. XM_016918924.4 → XP_016774413.2  sorbin and SH3 domain-containing protein 1 isoform X14

  17. XM_016918918.4 → XP_016774407.3  sorbin and SH3 domain-containing protein 1 isoform X9

  18. XM_016918909.4 → XP_016774398.3  sorbin and SH3 domain-containing protein 1 isoform X4

  19. XM_016918923.4 → XP_016774412.3  sorbin and SH3 domain-containing protein 1 isoform X13

  20. XM_016918920.4 → XP_016774409.3  sorbin and SH3 domain-containing protein 1 isoform X10

  21. XM_016918910.4 → XP_016774399.3  sorbin and SH3 domain-containing protein 1 isoform X5

  22. XM_016918938.4 → XP_016774427.3  sorbin and SH3 domain-containing protein 1 isoform X23

  23. XM_016918943.4 → XP_016774432.2  sorbin and SH3 domain-containing protein 1 isoform X27

    UniProtKB/TrEMBL
    A0A2I3RK36, A0A2J8PDY7, A0A6D2WPI4
    Conserved Domains (4) summary
    cd11916
    Location:1214 → 1272
    SH3_Sorbs1_3; Third (or C-terminal) Src Homology 3 domain of Sorbin and SH3 domain containing 1 (Sorbs1), also called ponsin
    cd11919
    Location:1035 → 1089
    SH3_Sorbs1_1; First Src Homology 3 domain of Sorbin and SH3 domain containing 1 (Sorbs1), also called ponsin
    cd11922
    Location:1109 → 1166
    SH3_Sorbs1_2; Second Src Homology 3 domain of Sorbin and SH3 domain containing 1 (Sorbs1), also called ponsin
    pfam02208
    Location:609 → 647
    Sorb; Sorbin homologous domain

  24. XM_016918935.4 → XP_016774424.3  sorbin and SH3 domain-containing protein 1 isoform X21

  25. XM_016918921.4 → XP_016774410.3  sorbin and SH3 domain-containing protein 1 isoform X11

  26. XM_016918922.4 → XP_016774411.2  sorbin and SH3 domain-containing protein 1 isoform X12

    Conserved Domains (4) summary
    cd11916
    Location:1965 → 2023
    SH3_Sorbs1_3; Third (or C-terminal) Src Homology 3 domain of Sorbin and SH3 domain containing 1 (Sorbs1), also called ponsin
    cd11919
    Location:1528 → 1582
    SH3_Sorbs1_1; First Src Homology 3 domain of Sorbin and SH3 domain containing 1 (Sorbs1), also called ponsin
    cd11922
    Location:1602 → 1659
    SH3_Sorbs1_2; Second Src Homology 3 domain of Sorbin and SH3 domain containing 1 (Sorbs1), also called ponsin
    pfam02208
    Location:609 → 647
    Sorb; Sorbin homologous domain

  27. XM_016918908.4 → XP_016774397.3  sorbin and SH3 domain-containing protein 1 isoform X3

  28. XM_016918917.4 → XP_016774406.2  sorbin and SH3 domain-containing protein 1 isoform X8

    Conserved Domains (4) summary
    cd11916
    Location:1985 → 2043
    SH3_Sorbs1_3; Third (or C-terminal) Src Homology 3 domain of Sorbin and SH3 domain containing 1 (Sorbs1), also called ponsin
    cd11919
    Location:1528 → 1582
    SH3_Sorbs1_1; First Src Homology 3 domain of Sorbin and SH3 domain containing 1 (Sorbs1), also called ponsin
    cd11922
    Location:1602 → 1659
    SH3_Sorbs1_2; Second Src Homology 3 domain of Sorbin and SH3 domain containing 1 (Sorbs1), also called ponsin
    pfam02208
    Location:609 → 647
    Sorb; Sorbin homologous domain

  29. XM_016918902.4 → XP_016774391.3  sorbin and SH3 domain-containing protein 1 isoform X1

  30. XM_016918955.4 → XP_016774444.1  sorbin and SH3 domain-containing protein 1 isoform X48

    UniProtKB/TrEMBL
    A0A2J8PDZ6

  31. XM_054660371.2 → XP_054516346.1  sorbin and SH3 domain-containing protein 1 isoform X36

  32. XM_016918946.4 → XP_016774435.2  sorbin and SH3 domain-containing protein 1 isoform X29

  33. XM_016918954.4 → XP_016774443.1  sorbin and SH3 domain-containing protein 1 isoform X47

    UniProtKB/TrEMBL
    A0A2J8PDZ6

  34. XM_054660379.2 → XP_054516354.1  sorbin and SH3 domain-containing protein 1 isoform X46

  35. XM_054660374.2 → XP_054516349.1  sorbin and SH3 domain-containing protein 1 isoform X39

  36. XM_054660377.2 → XP_054516352.1  sorbin and SH3 domain-containing protein 1 isoform X43

  37. XM_016918952.4 → XP_016774441.1  sorbin and SH3 domain-containing protein 1 isoform X41

    UniProtKB/TrEMBL
    A0A2I3SK60, A0A2J8PDX5, A0A2J8PDY6, A0A6D2VUM7
    Related
    ENSPTRP00000077369.1
    Conserved Domains (4) summary
    cd11916
    Location:757 → 815
    SH3_Sorbs1_3; Third (or C-terminal) Src Homology 3 domain of Sorbin and SH3 domain containing 1 (Sorbs1), also called ponsin
    cd11919
    Location:578 → 632
    SH3_Sorbs1_1; First Src Homology 3 domain of Sorbin and SH3 domain containing 1 (Sorbs1), also called ponsin
    cd11922
    Location:652 → 709
    SH3_Sorbs1_2; Second Src Homology 3 domain of Sorbin and SH3 domain containing 1 (Sorbs1), also called ponsin
    pfam02208
    Location:338 → 379
    Sorb; Sorbin homologous domain

  38. XM_054660369.2 → XP_054516344.1  sorbin and SH3 domain-containing protein 1 isoform X34

  39. XM_054660367.2 → XP_054516342.1  sorbin and SH3 domain-containing protein 1 isoform X32

  40. XM_054660375.2 → XP_054516350.1  sorbin and SH3 domain-containing protein 1 isoform X40

  41. XM_016918951.4 → XP_016774440.1  sorbin and SH3 domain-containing protein 1 isoform X37

    UniProtKB/TrEMBL
    A0A2J8PDZ6

  42. XM_054660370.2 → XP_054516345.1  sorbin and SH3 domain-containing protein 1 isoform X35

  43. XM_054660366.2 → XP_054516341.1  sorbin and SH3 domain-containing protein 1 isoform X31

  44. XM_016918949.4 → XP_016774438.1  sorbin and SH3 domain-containing protein 1 isoform X30

    UniProtKB/TrEMBL
    A0A2I3RK36, A0A2I3SI18, A0A2J8PDY7, A0A2J8PDZ1, A0A6D2WPI4, A0A6D2XUH9
    Related
    ENSPTRP00000076137.1
    Conserved Domains (4) summary
    cd11916
    Location:945 → 1003
    SH3_Sorbs1_3; Third (or C-terminal) Src Homology 3 domain of Sorbin and SH3 domain containing 1 (Sorbs1), also called ponsin
    cd11919
    Location:766 → 820
    SH3_Sorbs1_1; First Src Homology 3 domain of Sorbin and SH3 domain containing 1 (Sorbs1), also called ponsin
    cd11922
    Location:840 → 897
    SH3_Sorbs1_2; Second Src Homology 3 domain of Sorbin and SH3 domain containing 1 (Sorbs1), also called ponsin
    cl02617
    Location:361 → 399
    Sorb; Sorbin homologous domain

  45. XM_054660380.2 → XP_054516355.1  sorbin and SH3 domain-containing protein 1 isoform X49

  46. XM_016918953.4 → XP_016774442.1  sorbin and SH3 domain-containing protein 1 isoform X44

    UniProtKB/TrEMBL
    A0A2J8PDY1, A0A2J8PDZ6
    Related
    ENSPTRP00000086561.1
    Conserved Domains (4) summary
    cd11916
    Location:722 → 780
    SH3_Sorbs1_3; Third (or C-terminal) Src Homology 3 domain of Sorbin and SH3 domain containing 1 (Sorbs1), also called ponsin
    cd11919
    Location:543 → 597
    SH3_Sorbs1_1; First Src Homology 3 domain of Sorbin and SH3 domain containing 1 (Sorbs1), also called ponsin
    cd11922
    Location:617 → 674
    SH3_Sorbs1_2; Second Src Homology 3 domain of Sorbin and SH3 domain containing 1 (Sorbs1), also called ponsin
    pfam02208
    Location:247 → 288
    Sorb; Sorbin homologous domain

  47. XM_054660376.2 → XP_054516351.1  sorbin and SH3 domain-containing protein 1 isoform X42

  48. XM_054660378.2 → XP_054516353.1  sorbin and SH3 domain-containing protein 1 isoform X45

  49. XM_054660373.2 → XP_054516348.1  sorbin and SH3 domain-containing protein 1 isoform X38

  50. XM_054660368.2 → XP_054516343.1  sorbin and SH3 domain-containing protein 1 isoform X33

Nucleotide Protein
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