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SOCS4 suppressor of cytokine signaling 4 [ Pan troglodytes (chimpanzee) ]

Gene ID: 452919, updated on 29-Mar-2024

Summary

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Official Symbol
SOCS4provided by VGNC
Official Full Name
suppressor of cytokine signaling 4provided by VGNC
Primary source
VGNC:VGNC:12539
Locus tag
CK820_G0002486
See related
Ensembl:ENSPTRG00000043978
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See SOCS4 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 15 NC_072413.2 (53021876..53044272)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 14 NC_072412.1 (46289106..46311505)

Chromosome 15 - NC_072413.2Genomic Context describing neighboring genes Neighboring gene U6atac minor spliceosomal RNA Neighboring gene GTP cyclohydrolase 1 Neighboring gene farnesyl pyrophosphate synthase-like Neighboring gene WD repeat and HMG-box DNA binding protein 1 Neighboring gene mitogen-activated protein kinase 1 interacting protein 1 like Neighboring gene galectin 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1-phosphatidylinositol-3-kinase regulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of epidermal growth factor-activated receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phosphatidylinositol phosphate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of proteasomal ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of phosphatidylinositol 3-kinase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
suppressor of cytokine signaling 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072413.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    53021876..53044272
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009427840.5 → XP_009426115.3  suppressor of cytokine signaling 4

  2. XM_009427839.5 → XP_009426114.3  suppressor of cytokine signaling 4

  3. XM_009427842.5 → XP_009426117.3  suppressor of cytokine signaling 4

  4. XM_009427841.5 → XP_009426116.3  suppressor of cytokine signaling 4

  5. XM_016926114.3 → XP_016781603.2  suppressor of cytokine signaling 4

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials
Miscellaneous