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NR2F2 nuclear receptor subfamily 2 group F member 2 [ Pan troglodytes (chimpanzee) ]

Gene ID: 467769, updated on 29-Mar-2024

Summary

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Official Symbol
NR2F2provided by VGNC
Official Full Name
nuclear receptor subfamily 2 group F member 2provided by VGNC
Primary source
VGNC:VGNC:13409
Locus tag
CK820_G0031895
See related
Ensembl:ENSPTRG00000044693
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 15
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 16 NC_072414.2 (88137402..88150397)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 15 NC_072413.1 (88112134..88125129)

Chromosome 16 - NC_072414.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107968432 Neighboring gene uncharacterized LOC107968431 Neighboring gene uncharacterized LOC104002446 Neighboring gene uncharacterized LOC104002445 Neighboring gene uncharacterized LOC134808480 Neighboring gene tubulin alpha-1C chain-like Neighboring gene uncharacterized LOC107968541

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nuclear receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables retinoic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in anatomical structure development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
COUP transcription factor 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072414.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    88137402..88150397
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016927480.3 → XP_016782969.1  COUP transcription factor 2 isoform X2

    UniProtKB/TrEMBL
    A0A2I3TMW0, A0A2J8L7A7, A0A6D2VW27, K7DEU3
    Related
    ENSPTRP00000065739.1
    Conserved Domains (1) summary
    cd06948
    Location:44 → 278
    NR_LBD_COUP-TF; Ligand binding domain of chicken ovalbumin upstream promoter transcription factors, a member of the nuclear receptor family

  2. XM_001135545.7 → XP_001135545.1  COUP transcription factor 2 isoform X1

    See identical proteins and their annotated locations for XP_001135545.1

    UniProtKB/TrEMBL
    A0A2J8L7B4, A0A6D2XVR7, H2QA47, H2R404
    Related
    ENSPTRP00000078925.1
    Conserved Domains (2) summary
    cd06948
    Location:177 → 411
    NR_LBD_COUP-TF; Ligand binding domain of chicken ovalbumin upstream promoter transcription factors, a member of the nuclear receptor family
    cd06958
    Location:79 → 151
    NR_DBD_COUP_TF; DNA-binding domain of chicken ovalbumin upstream promoter transcription factors (COUP-TFs) is composed of two C4-type zinc fingers

  3. XM_001135366.7 → XP_001135366.1  COUP transcription factor 2 isoform X3

    See identical proteins and their annotated locations for XP_001135366.1

    UniProtKB/TrEMBL
    A0A2I3TMW0, A0A2J8L7A9
    Conserved Domains (1) summary
    cd06948
    Location:24 → 258
    NR_LBD_COUP-TF; Ligand binding domain of chicken ovalbumin upstream promoter transcription factors, a member of the nuclear receptor family

  4. XM_009429892.5 → XP_009428167.1  COUP transcription factor 2 isoform X3

    See identical proteins and their annotated locations for XP_009428167.1

    UniProtKB/TrEMBL
    A0A2I3TMW0, A0A2J8L7A9
    Conserved Domains (1) summary
    cd06948
    Location:24 → 258
    NR_LBD_COUP-TF; Ligand binding domain of chicken ovalbumin upstream promoter transcription factors, a member of the nuclear receptor family
Nucleotide Protein
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