U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

WDR12 WD repeat domain 12 [ Canis lupus familiaris (dog) ]

Gene ID: 478876, updated on 5-Mar-2024

Summary

Go to the top of the page Help
Official Symbol
WDR12provided by VGNC
Official Full Name
WD repeat domain 12provided by VGNC
Primary source
VGNC:VGNC:48351
See related
Ensembl:ENSCAFG00845015685
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 37
Exon count:
15
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 37 NC_051841.1 (11699520..11724283, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 37 NC_006619.4 (12646140..12670826, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 37 NC_049258.1 (11621045..11645767, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 37 NC_049297.1 (11655780..11680470, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 37 NC_049778.1 (11627136..11651850, complement)

Chromosome 37 - NC_051841.1Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 117 member B Neighboring gene islet cell autoantigen 1 like Neighboring gene uncharacterized LOC102152753 Neighboring gene U4 spliceosomal RNA Neighboring gene calcium responsive transcription factor Neighboring gene methylosome protein 50-like

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

Pathways from PubChem

Go to the top of the page

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ribosome biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of PeBoW complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of preribosome, large subunit precursor IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
ribosome biogenesis protein WDR12

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051841.1 Reference ROS_Cfam_1.0

    Range
    11699520..11724283 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038447672.1 → XP_038303600.1  ribosome biogenesis protein WDR12

    UniProtKB/TrEMBL
    A0A8C0JM64, A0A8I3P0V5, A0A8P0SH55
    Conserved Domains (3) summary
    cd00200
    Location:100 → 409
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:193 → 255
    7WD40; WD40 repeat [structural motif]
    pfam08154
    Location:4 → 70
    NLE; NLE (NUC135) domain

  2. XM_038447670.1 → XP_038303598.1  ribosome biogenesis protein WDR12

    UniProtKB/TrEMBL
    A0A8C0JM64, A0A8I3P0V5, A0A8P0SH55
    Related
    ENSCAFP00845022011.1, ENSCAFT00845027966.1
    Conserved Domains (3) summary
    cd00200
    Location:100 → 409
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:193 → 255
    7WD40; WD40 repeat [structural motif]
    pfam08154
    Location:4 → 70
    NLE; NLE (NUC135) domain

  3. XM_038447671.1 → XP_038303599.1  ribosome biogenesis protein WDR12

    UniProtKB/TrEMBL
    A0A8C0JM64, A0A8I3P0V5, A0A8P0SH55
    Conserved Domains (3) summary
    cd00200
    Location:100 → 409
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:193 → 255
    7WD40; WD40 repeat [structural motif]
    pfam08154
    Location:4 → 70
    NLE; NLE (NUC135) domain

  4. XM_038447669.1 → XP_038303597.1  ribosome biogenesis protein WDR12

    UniProtKB/TrEMBL
    A0A8C0JM64, A0A8I3P0V5, A0A8P0SH55
    Conserved Domains (3) summary
    cd00200
    Location:100 → 409
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:193 → 255
    7WD40; WD40 repeat [structural motif]
    pfam08154
    Location:4 → 70
    NLE; NLE (NUC135) domain

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049297.1 Alternate UMICH_Zoey_3.1

    Range
    11655780..11680470 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038521729.1 → XP_038377657.1  ribosome biogenesis protein WDR12

    Conserved Domains (3) summary
    cd00200
    Location:100 → 409
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:193 → 255
    7WD40; WD40 repeat [structural motif]
    pfam08154
    Location:4 → 70
    NLE; NLE (NUC135) domain

  2. XM_038521727.1 → XP_038377655.1  ribosome biogenesis protein WDR12

    Conserved Domains (3) summary
    cd00200
    Location:100 → 409
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:193 → 255
    7WD40; WD40 repeat [structural motif]
    pfam08154
    Location:4 → 70
    NLE; NLE (NUC135) domain

  3. XM_038521728.1 → XP_038377656.1  ribosome biogenesis protein WDR12

    Conserved Domains (3) summary
    cd00200
    Location:100 → 409
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:193 → 255
    7WD40; WD40 repeat [structural motif]
    pfam08154
    Location:4 → 70
    NLE; NLE (NUC135) domain

  4. XM_038521726.1 → XP_038377654.1  ribosome biogenesis protein WDR12

    Conserved Domains (3) summary
    cd00200
    Location:100 → 409
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:193 → 255
    7WD40; WD40 repeat [structural motif]
    pfam08154
    Location:4 → 70
    NLE; NLE (NUC135) domain

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049778.1 Alternate UNSW_CanFamBas_1.0

    Range
    11627136..11651850 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038649837.1 → XP_038505765.1  ribosome biogenesis protein WDR12

    Conserved Domains (3) summary
    cd00200
    Location:100 → 409
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:193 → 255
    7WD40; WD40 repeat [structural motif]
    pfam08154
    Location:4 → 70
    NLE; NLE (NUC135) domain

  2. XM_038649835.1 → XP_038505763.1  ribosome biogenesis protein WDR12

    Conserved Domains (3) summary
    cd00200
    Location:100 → 409
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:193 → 255
    7WD40; WD40 repeat [structural motif]
    pfam08154
    Location:4 → 70
    NLE; NLE (NUC135) domain

  3. XM_038649836.1 → XP_038505764.1  ribosome biogenesis protein WDR12

    Conserved Domains (3) summary
    cd00200
    Location:100 → 409
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:193 → 255
    7WD40; WD40 repeat [structural motif]
    pfam08154
    Location:4 → 70
    NLE; NLE (NUC135) domain

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049258.1 Alternate UU_Cfam_GSD_1.0

    Range
    11621045..11645767 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038585435.1 → XP_038441363.1  ribosome biogenesis protein WDR12

    UniProtKB/TrEMBL
    A0A8C0JM64, A0A8I3P0V5, A0A8P0SH55
    Conserved Domains (3) summary
    cd00200
    Location:100 → 409
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:193 → 255
    7WD40; WD40 repeat [structural motif]
    pfam08154
    Location:4 → 70
    NLE; NLE (NUC135) domain

  2. XM_038585433.1 → XP_038441361.1  ribosome biogenesis protein WDR12

    UniProtKB/TrEMBL
    A0A8C0JM64, A0A8I3P0V5, A0A8P0SH55
    Conserved Domains (3) summary
    cd00200
    Location:100 → 409
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:193 → 255
    7WD40; WD40 repeat [structural motif]
    pfam08154
    Location:4 → 70
    NLE; NLE (NUC135) domain

  3. XM_038585434.1 → XP_038441362.1  ribosome biogenesis protein WDR12

    UniProtKB/TrEMBL
    A0A8C0JM64, A0A8I3P0V5, A0A8P0SH55
    Conserved Domains (3) summary
    cd00200
    Location:100 → 409
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:193 → 255
    7WD40; WD40 repeat [structural motif]
    pfam08154
    Location:4 → 70
    NLE; NLE (NUC135) domain

  4. XM_038585432.1 → XP_038441360.1  ribosome biogenesis protein WDR12

    UniProtKB/TrEMBL
    A0A8C0JM64, A0A8I3P0V5, A0A8P0SH55
    Conserved Domains (3) summary
    cd00200
    Location:100 → 409
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:193 → 255
    7WD40; WD40 repeat [structural motif]
    pfam08154
    Location:4 → 70
    NLE; NLE (NUC135) domain

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006619.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    12646140..12670826 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038463676.1 → XP_038319604.1  ribosome biogenesis protein WDR12

    UniProtKB/TrEMBL
    A0A8C0JM64, A0A8I3P0V5, A0A8P0SH55
    Conserved Domains (3) summary
    cd00200
    Location:100 → 409
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:193 → 255
    7WD40; WD40 repeat [structural motif]
    pfam08154
    Location:4 → 70
    NLE; NLE (NUC135) domain

  2. XM_536036.7 → XP_536036.3  ribosome biogenesis protein WDR12

    See identical proteins and their annotated locations for XP_536036.3

    UniProtKB/TrEMBL
    A0A8C0JM64, A0A8I3P0V5, A0A8P0SH55
    Conserved Domains (3) summary
    cd00200
    Location:100 → 409
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:193 → 255
    7WD40; WD40 repeat [structural motif]
    pfam08154
    Location:4 → 70
    NLE; NLE (NUC135) domain

  3. XM_005640555.4 → XP_005640612.1  ribosome biogenesis protein WDR12

    See identical proteins and their annotated locations for XP_005640612.1

    UniProtKB/TrEMBL
    A0A8C0JM64, A0A8I3P0V5, A0A8P0SH55
    Conserved Domains (3) summary
    cd00200
    Location:100 → 409
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:193 → 255
    7WD40; WD40 repeat [structural motif]
    pfam08154
    Location:4 → 70
    NLE; NLE (NUC135) domain

  4. XM_022415172.2 → XP_022270880.1  ribosome biogenesis protein WDR12

    UniProtKB/TrEMBL
    A0A8C0JM64, A0A8I3P0V5, A0A8P0SH55
    Conserved Domains (3) summary
    cd00200
    Location:100 → 409
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:193 → 255
    7WD40; WD40 repeat [structural motif]
    pfam08154
    Location:4 → 70
    NLE; NLE (NUC135) domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Miscellaneous